Escherichia coli JX21CE33 |
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Putative Escherichia coli JX21CE33 RM systems
Ref: He,D. and Feng,Y. unpublished
REBASE ref # 38512
| Sequence length: | GenBank #: | |
| Chromosome: | 4,668,640 bp | CP149449 |
| plasmid pCE33-1: | 160,933 bp | CP149451 |
| plasmid pCE33-2: | 57,902 bp | CP149452 |
| plasmid pCE33-5: | 172,459 bp | CP149450 |
REBASE acronym: Eco1CE33
Org_num: 76878
All begin WG890_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3655 | 394 aa hypothetical protein | |||
| 3660 | R | SflFF64ORF3630P (100% identity) | Eco1CE33ORF3670P | |
| 3665 | S | S.SflFF64ORF3630P (100% identity) | S.Eco1CE33ORF3670P | |
| 3670 | M | M.SflFF64ORF3630P (100% identity) | M.Eco1CE33ORF3670P | |
| 3675 | DUF262 domain-containing protein | |||
| 5125 | anti-phage protein KwaA | |||
| 5130 | R | EcoM1711ORFAP (100% identity) | GGANNNNNCTC | Eco1CE33ORF5140P |
| 5135 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Eco1CE33ORF5140P |
| 5140 | M | M.KpnS1313ORF16435P (98% identity) | GGANNNNNCTC | M.Eco1CE33ORF5140P |
| 5145 | 87 aa hypothetical protein | |||
| 19670 | IS1-like element IS1A family transposase | |||
| 19675 | S | S.EcoCE33ORF19675P (100% identity) | S.Eco1CE33ORF19675P | |
| 19680 | endoribonuclease SymE | |||
| plasmid pCE33-2 | ||||
| 24780 | replication initiation protein | |||
| 24785 | M | M.EcoE35ORF23380P (100% identity) | M.Eco1CE33ORF24785P | |
| 24790 | S | S.EcoE35ORF23380P (100% identity) | S.Eco1CE33ORF24785P | |
| 24795 | R | EcoE35ORF23380P (100% identity) | Eco1CE33ORF24785P | |
| 24800 | recombinase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1625 | cell division protein DamX | |||
| 1630 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1CE33DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco1CE33ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 7095 | recombination protein NinB | |||
| 7100 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1CE33ORF7100P |
| 7105 | NinE family protein | |||
| 9445 | phosphohydrolase | |||
| 9450 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco1CE33DcmP |
| 9455 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco1CE33DcmP |
| 9460 | drug/metabolite exporter YedA | |||
| 19955 | IS5-like element ISKpn26 family transposase | |||
| 19960 | R | SflFF64ORF19855P (100% identity) | GAAC | Eco1CE33ORF19960P |
| 19965 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pCE33-1 | ||||
| 24440 | 97 aa hypothetical protein | |||
| 24445 | M | M.Xca80ORFEP (100% identity) | M.Eco1CE33ORF24445P | |
| 24450 | 73 aa hypothetical protein | |||
| plasmid pCE33-2 | ||||
| 24800 | recombinase family protein | |||
| 24805 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco1CE33ORF24810P |
| 24810 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco1CE33ORF24810P |
| 24815 | IS1 family transposase | |||
| plasmid pCE33-5 | ||||
| 22900 | 56 aa hypothetical protein | |||
| 22905 | M | M.Sen23ORF25130P (100% identity) | CCWGG | M.Eco1CE33ORF22905P |
| 22910 | thermonuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19680 | endoribonuclease SymE | |||
| ??? | R | EcoVA2GmrSDP (100% identity) | Eco1CE33GmrSDP | |
| 19695 | IS1-like element IS1A family transposase | |||