Escherichia coli Z1323PEC0009 |
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Putative Escherichia coli Z1323PEC0009 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 4,868,214 bp | CP148286 |
| plasmid pZ1323PEC0009-2: | 96,053 bp | CP148287 |
REBASE acronym: EcoPEC0009
Org_num: 76910
All begin WHU06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18290 | NADPH-dependent aldehyde reductase Ahr | |||
| 18300 | R | Eco0423ORF21320P (99% identity) | CYYANNNNNNRTGA | EcoPEC0009ORF18310P |
| 18305 | S | S.EcoC9707I (100% identity) | CYYANNNNNNRTGA | S.EcoPEC0009ORF18310P |
| 18310 | M | M.Eco0423ORF21320P (100% identity) | CYYANNNNNNRTGA | M.EcoPEC0009ORF18310P |
| 18315 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4990 | cell division protein DamX | |||
| 4995 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPEC0009DamP |
| 5000 | ribulose-phosphate 3-epimerase | |||
| 5515 | DUF2556 family protein | |||
| 5520 | M | M.Eco9052ORF481P (96% identity) | ATGCAT | M.EcoPEC0009ORF5520P |
| 5525 | site-specific integrase | |||
| 10420 | flagella biosynthesis regulator Flk | |||
| 10425 | M | M.Efe65411ORF7205P (100% identity) | M.EcoPEC0009ORF10425P | |
| 10430 | Com family DNA-binding transcriptional | |||
| 11935 | LexA family transcriptional regulator | |||
| 11940 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoPEC0009ORF11940P |
| 11945 | PerC family transcriptional regulator | |||
| 12800 | phosphohydrolase | |||
| 12805 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoPEC0009DcmP |
| 12810 | V | V.EcoSC477DcmP (100% identity) | V.EcoPEC0009DcmP | |
| 12815 | drug/metabolite exporter YedA | |||
| 18325 | McrC family protein | |||
| 18330 | R | Eco0423ORF21300P (99% identity) | EcoPEC0009ORF18330P | |
| 18335 | HNH endonuclease | |||
| 23870 | replication endonuclease | |||
| 23875 | M | M.EcoS081ORF28560P (100% identity) | GATC | M.EcoPEC0009ORF23875P |
| 23880 | TraR/DksA family transcriptional regulator | |||
| plasmid pZ1323PEC0009-2 | ||||
| 24465 | recombination-associated protein RdgC | |||
| 24470 | M | M.Sen94620ORF28085P (99% identity) | M.EcoPEC0009ORF24470P | |
| 24475 | 88 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18315 | DUF4942 domain-containing protein | |||
| 18320 | R | Eco0423McrBP (100% identity) | EcoPEC0009McrBP | |
| 18325 | R | Eco0423McrCP (99% identity) | EcoPEC0009McrCP | |
| 18330 | HNH endonuclease | |||
| 18510 | type I restriction-modification system subunit M | |||
| 18515 | R | EcoEC0014MrrP (100% identity) | EcoPEC0009MrrP | |
| 18520 | 34 aa hypothetical protein | |||