Escherichia coli Z1323CEC0003 |
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Putative Escherichia coli Z1323CEC0003 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,371,873 bp | CP148493 |
| plasmid pZ1323CEC0003-3: | 105,468 bp | CP148495 |
REBASE acronym: EcoC0003
Org_num: 76645
All begin WHU08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5475 | 63 aa hypothetical protein | |||
| 5480 | R | EcoPEC0006ORF14595P (100% identity) | CACNNNNNNTCC | EcoC0003ORF5490P |
| 5485 | S | S.Sen1467ORF14775P (100% identity) | CACNNNNNNTCC | S.EcoC0003ORF5490P |
| 5490 | M | M.EcoPEC0006ORF14595P (100% identity) | CACNNNNNNTCC | M.EcoC0003ORF5490P |
| 5495 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | 318 aa hypothetical protein | |||
| 25 | M | M.EcoSCU109ORF25P (100% identity) | M.EcoC0003ORF25P | |
| 30 | IS21-like element ISEc12 family transposase | |||
| 960 | 28 aa hypothetical protein | |||
| 965 | M | M.EcoPEC0001ORF7750P (100% identity) | M.EcoC0003ORF965P | |
| 970 | IS3 family transposase | |||
| 4075 | NinE family protein | |||
| 4080 | M | M.EcoPEC0001ORF4630P (100% identity) | GATC | M.EcoC0003ORF4080P |
| 4085 | recombination protein NinB | |||
| 8590 | TraR/DksA family transcriptional regulator | |||
| 8595 | M | M.EcoPEC0001ORF980P (100% identity) | GATC | M.EcoC0003ORF8595P |
| 8600 | replication endonuclease | |||
| 9695 | DUF977 family protein | |||
| 9700 | M | M.EcoPEC0001ORF215P (100% identity) | M.EcoC0003ORF9700P | |
| 9705 | 84 aa hypothetical protein | |||
| 10860 | phosphohydrolase | |||
| 10865 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC0003DcmP |
| 10870 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC0003DcmP |
| 10875 | drug/metabolite exporter YedA | |||
| 13200 | IS3 family transposase | |||
| 13205 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC0003ORF13205P | |
| 13210 | 60 aa hypothetical protein | |||
| 16500 | NinE family protein | |||
| 16505 | M | M.EcoPEC0001ORF24880P (100% identity) | GATC | M.EcoC0003ORF16505P |
| 16510 | recombination protein NinB | |||
| 19415 | PerC family transcriptional regulator | |||
| 19420 | M | M.EcoC0014ORF10040P (99% identity) | M.EcoC0003ORF19420P | |
| 19425 | serine/threonine protein phosphatase | |||
| 23830 | DNA-binding transcriptional regulator Fis | |||
| 23835 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoC0003ORF23835P |
| 23840 | DUF2556 family protein | |||
| 24545 | ribulose-phosphate 3-epimerase | |||
| 24550 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0003DamP |
| 24555 | cell division protein DamX | |||
| plasmid pZ1323CEC0003-3 | ||||
| 28430 | 103 aa hypothetical protein | |||
| 28435 | M | M.EcoE2aORF26760P (100% identity) | SAY | M.EcoC0003ORF28435P |
| 28440 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2945 | type I restriction-modification system | |||
| 2950 | R | Ssp28760MrrP (100% identity) | EcoC0003MrrP | |
| 2955 | GTPase | |||
| 15320 | isocitrate/isopropylmalate family dehydrogenase | |||
| 15325 | R | Ecos15955McrCP (95% identity) | EcoC0003McrCP | |
| 15330 | R | EcoPEC0001McrBP (100% identity) | EcoC0003McrBP | |
| 15335 | tail fiber assembly protein | |||