Alteromonas macleodii KD01 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Alteromonas macleodii KD01 RM systems
Ref: Zhang,D. and Yin,Y. unpublished
REBASE ref # 38504
| Sequence length: | GenBank #: | |
| Chromosome: | 4,603,466 bp | CP147978 |
| plasmid pKD01: | 336,015 bp | CP147979 |
| plasmid pKD03: | 77,913 bp | CP147981 |
REBASE acronym: AmaKD01
Org_num: 76408
All begin WE348_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4260 | 468 aa hypothetical protein | |||
| 4265 | M | M1.Ama615ORF4520P (93% identity) | M1.AmaKD01ORF4265P | |
| 4270 | M | M2.PspS1ORF14175P (95% identity) | M2.AmaKD01ORF4265P | |
| 4275 | S | S.Mbu5GORFBP (28% identity) | S.AmaKD01ORF4265P | |
| 4280 | R | Ama615ORF4520P (97% identity) | AmaKD01ORF4265P | |
| 4285 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | DUF2970 domain-containing protein | |||
| 1810 | M | M.AmaA3DamP (99% identity) | M.AmaKD01DamP | |
| 1815 | cell division protein DamX | |||
| plasmid pKD01 | ||||
| 21240 | RsmD family RNA methyltransferase | |||
| 21245 | M | M.AmeRG65ORF19670P (96% identity) | M.AmaKD01ORF21245P | |
| 21250 | 60 aa hypothetical protein | |||
| 21315 | DUF6283 family protein | |||
| 21320 | M | M.VcaC013ORF26365P (38% identity) | M.AmaKD01ORF21320P | |
| 21325 | phosphate ABC transporter substrate-binding | |||
| plasmid pKD03 | ||||
| 23135 | 102 aa hypothetical protein | |||
| 23140 | M | M.PrhCg6ORFEP (45% identity) | M.AmaKD01ORF23140P | |
| 23145 | methyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8895 | SNF2-related protein | |||
| 8900 | M | M.RorVR1ORF60280P (60% identity) | M.AmaKD01ORF8900P | |
| 8905 | R | RorVR1ORF60280P (87% identity) | AmaKD01ORF8900P | |
| 8910 | 163 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 400 | nuclease-related domain-containing protein | |||
| 405 | R | Ama673ORF440P (100% identity) | AmaKD01ORF405P | |
| 410 | class I SAM-dependent methyltransferase | |||
| 15745 | alpha/beta fold hydrolase | |||
| 15750 | R | AmaPu01McrCP (100% identity) | AmaKD01McrCP | |
| 15755 | R | AmaPu01McrBP (100% identity) | AmaKD01McrBP | |
| 15760 | NAD(P)H-dependent oxidoreductase | |||