Glaesserella parasuis H16SD2BY4 |
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Putative Glaesserella parasuis H16SD2BY4 RM systems
Ref: Xiaowei,G. unpublished
REBASE ref # 38517
Complete sequence: 2,388,064 bp
GenBank #: CP147984
REBASE acronym: Gpa4
Org_num: 76441
All begin WAE38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6255 | histidinol-phosphate transaminase | |||
| 6260 | R | Hpa174ORF186P (98% identity) | Gpa4ORF6280P | |
| 6265 | HigA family addiction module antitoxin | |||
| 6270 | 231 aa hypothetical protein | |||
| 6275 | S | S.Hpa29755ORF346P (63% identity) | S.Gpa4ORF6280P | |
| 6280 | M | M.Gpa70512ORF5180P (99% identity) | M.Gpa4ORF6280P | |
| 6285 | 3-phosphoserine/phosphohydroxythreonine | |||
| 9910 | 87 aa hypothetical protein | |||
| 9915 | R | GpaHF57ORF9645P (99% identity) | Gpa4ORF9940P | |
| 9920 | 117 aa hypothetical protein | |||
| 9925 | DUF1829 domain-containing protein | |||
| 9930 | S | S.Gpa1807ORF10310P (99% identity) | S.Gpa4ORF9940P | |
| 9935 | AAA family ATPase | |||
| 9940 | M | M.HpaSW114ORF1565P (99% identity) | M.Gpa4ORF9940P | |
| 9945 | transposase | |||
| 11585 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 11590 | S | S.HpaNNII (99% identity) | GTANNNNNNNCTTG | S.Gpa4ORF11605P |
| 11595 | R | GpaHF57ORF11115P (99% identity) | GTANNNNNNNCTTG | Gpa4ORF11605P |
| 11600 | ATP-binding protein | |||
| 11605 | M | M.Gpa1807ORF11825P (100% identity) | GTANNNNNNNCTTG | M.Gpa4ORF11605P |
| 11610 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1250 | MarR family winged helix-turn-helix | |||
| 1255 | RM | GpaHPS7ORF940P (99% identity) | Gpa4ORF1255P | |
| 1260 | S | S1.Gpa1433ORF885P (97% identity) | S1.Gpa4ORF1255P | |
| 1265 | S | S2.GpaHPS1ORF10810P (98% identity) | S2.Gpa4ORF1255P | |
| 1270 | virulence RhuM family protein | |||
| 3375 | 86 aa hypothetical protein | |||
| 3380 | M | M.Gpa4ORF700P (100% identity) | M.Gpa4ORF3380P | |
| 3385 | enoyl-CoA hydratase | |||
| 3690 | sodium-dependent transporter | |||
| 3695 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.Gpa4ORF3695P |
| 3700 | 3-dehydroquinate synthase | |||
| 4700 | 56 aa hypothetical protein | |||
| 4705 | M | M.Gpa4ORF11490P (100% identity) | M.Gpa4ORF4705P | |
| 4710 | S | S.Gpa4ORF11490P (100% identity) | S.Gpa4ORF4705P | |
| 4715 | DDE transposase | |||
| 5390 | 86 aa hypothetical protein | |||
| 5395 | M | M.HphSMORF53P (98% identity) | M.Gpa4ORF5395P | |
| 5400 | enoyl-CoA hydratase | |||
| 7705 | 177 aa hypothetical protein | |||
| 7710 | M | Gpa4557IV (55% identity) | M.Gpa4ORF7710P | |
| 7715 | aspartate-semialdehyde dehydrogenase | |||
| 11485 | 49 aa hypothetical protein | |||
| 11490 | M | M.Gpa4ORF4705P (100% identity) | M.Gpa4ORF11490P | |
| 11495 | S | S.Gpa4ORF4705P (100% identity) | S.Gpa4ORF11490P | |
| 11500 | DDE transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1095 | Fic family protein | |||
| 1100 | R | HpaNagORF1223P (99% identity) | Gpa4ORF1105P | |
| 1105 | M | M.GpaXP11ORF10010P (50% identity) | M.Gpa4ORF1105BP | |
| 1110 | M | M.Gpa104ORFHP (40% identity) | M.Gpa4ORF1105AP | |
| 1115 | ketol-acid reductoisomerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2460 | amino acid ABC transporter ATP-binding protein | |||
| ??? | R | GpaZ44GmrSDP (99% identity) | Gpa4GmrSDP | |
| 2475 | FAD-dependent oxidoreductase | |||