Salmonella enterica subsp. enterica serovar Newport CFSAN024495 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN024495 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,756,523 bp
GenBank #: CP147854
REBASE acronym: Sen495
Org_num: 76591
All begin JYM96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19435 | 322 aa hypothetical protein | |||
| 19440 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen495ORF19445P |
| 19445 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen495ORF19445P |
| 19450 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen495ORF19445P |
| 19455 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.Sen495DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen495ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 3130 | DUF2732 family protein | |||
| 3135 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen495ORF3135P |
| 3140 | replication endonuclease | |||
| 9165 | phosphohydrolase | |||
| 9170 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen495DcmP |
| 9175 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen495DcmP |
| 9180 | drug/metabolite exporter YedA | |||
| 19575 | YebC/PmpR family DNA-binding transcriptional | |||
| 19580 | R | SenS224ORF20045P (100% identity) | Sen495ORF19580P | |
| 19585 | primase-helicase zinc-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17220 | small effector SsaA | |||
| 17225 | R | Ssp6947IIP (100% identity) | CAGAG | Sen495ORF17230P |
| 17230 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen495ORF17230P |
| 17235 | MFS transporter | |||