Escherichia coli GN03551 |
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Putative Escherichia coli GN03551 RM systems
Ref: Parsons,J.B. et al. Proc Natl Acad Sci U S A 121 (3), e2314514121 (2024)
REBASE ref # 38499
| Sequence length: | GenBank #: | |
| Chromosome: | 4,964,976 bp | CP147535 |
| plasmid unnamed1: | 128,727 bp | CP147536 |
REBASE acronym: Eco551
Org_num: 76371
All begin WCU03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3570 | transposase domain-containing protein | |||
| 3575 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco551ORF3575P |
| 3580 | AAA family ATPase | |||
| 3585 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco551ORF3575P |
| 3590 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco551ORF3575P |
| 3595 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1935 | cell division protein DamX | |||
| 1940 | M | M.Eco3139DamP (100% identity) | GATC | M.Eco551DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 2465 | DUF2556 family protein | |||
| 2470 | M | M.Ecost20ORFAP (100% identity) | ATGCAT | M.Eco551ORF2470P |
| 2475 | DNA-binding transcriptional regulator Fis | |||
| 13830 | drug/metabolite exporter YedA | |||
| 13835 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco551DcmP |
| 13840 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.Eco551DcmP |
| 13845 | phosphohydrolase | |||
| 20195 | RM | EcoXDLORF21245P (100% identity) | Eco551ORF20195P | |
| 20200 | DEAD/DEAH box helicase | |||
| 20240 | HNH endonuclease | |||
| 20245 | R | EcoXDLORF21295P (100% identity) | Eco551ORF20245P | |
| 20250 | 332 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 23965 | 103 aa hypothetical protein | |||
| 23970 | M | M.UbapRSB107ORFAP (66% identity) | M.Eco551ORF23970P | |
| 23975 | conjugal transfer mating-pair stabilization | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19895 | endoribonuclease SymE | |||
| ??? | R | EcoSBF22GmrSDP (100% identity) | Eco551GmrSDP | |
| 19910 | 15 aa hypothetical protein | |||