Pseudomonas chlororaphis ZH2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas chlororaphis ZH2 RM systems
Ref: Xiao,R. unpublished
REBASE ref # 38465
Complete sequence: 7,249,755 bp
GenBank #: CP146886
REBASE acronym: PchZH2
Org_num: 76282
All begin V8U11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13855 | restriction endonuclease | |||
| 13860 | R | PchGP72ORFAP (97% identity) | PchZH2ORF13875P | |
| 13865 | 3-5 exonuclease | |||
| 13870 | S | S.PspP8241ORF4125P (45% identity) | S.PchZH2ORF13875P | |
| 13875 | M | M.Pch332ORF13595P (96% identity) | M.PchZH2ORF13875P | |
| 13880 | fructose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8130 | DNA topoisomerase III | |||
| 8135 | M | M.Pae1681ORF6245P (80% identity) | M.PchZH2ORF8135P | |
| 8140 | ATP-binding protein | |||
| 19375 | 112 aa hypothetical protein | |||
| 19380 | M | M.PclR47ORF17740P (99% identity) | M.PchZH2ORF19380P | |
| 19385 | lysis system i-spanin subunit Rz | |||
| 28930 | AAA family ATPase | |||
| 28935 | M | M.PchL19ORFAP (99% identity) | M.PchZH2ORF28935P | |
| 28940 | 94 aa hypothetical protein | |||
| 32925 | AAA family ATPase | |||
| 32930 | R | PaeE04DptHP (92% identity) | PchZH2DptHP | |
| 32935 | DNA sulfur modification protein DndD | |||
| 32930 | FtsK/SpoIIIE domain-containing protein | |||
| 32935 | M | M.PaeE04DndD2P (87% identity) | M.PchZH2DndDP | |
| 32940 | 65 aa hypothetical protein | |||
| 32950 | DGQHR domain-containing protein | |||
| 32955 | M | M.Pae5532DndEP (80% identity) | M.PchZH2DndEP | |
| 32960 | DNA sulfur modification protein DndD | |||
| 32955 | DNA sulfur modification protein DndE | |||
| 32960 | M | M.PaeE04DndDP (88% identity) | M.PchZH2DndD2P | |
| 32965 | DNA phosphorothioation system sulfurtransferase | |||
| 32960 | DNA sulfur modification protein DndD | |||
| 32965 | M | M.PaeE04DndCP (93% identity) | M.PchZH2DndCP | |
| 32970 | DNA sulfur modification protein DndB | |||
| 32965 | DNA phosphorothioation system sulfurtransferase | |||
| 32970 | M | M.PaeE04DndBP (93% identity) | M.PchZH2DndBP | |
| 32975 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13850 | RNA polymerase sigma factor SigJ | |||
| 13855 | R | Pch332MrrP (99% identity) | PchZH2MrrP | |
| 13860 | DEAD/DEAH box helicase family protein | |||