Shewanella baltica TMP1 |
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Putative Shewanella baltica TMP1 RM systems
Ref: Akulava,V.D. et al. unpublished
REBASE ref # 38478
Complete sequence: 5,303,565 bp
GenBank #: CP146610
REBASE acronym: SbaTMP1
Org_num: 76311
All begin V8687_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2220 | SprT family zinc-dependent metalloprotease | |||
| 2225 | R | SonBORF2355P (98% identity) | SbaTMP1ORF2260P | |
| 2230 | 52 aa hypothetical protein | |||
| 2235 | 40 aa hypothetical protein | |||
| 2240 | 418 aa hypothetical protein | |||
| 2245 | 75 aa hypothetical protein | |||
| 2250 | IS3 family transposase | |||
| 2255 | S | S.Sba128ORFGP (44% identity) | S.SbaTMP1ORF2260P | |
| 2260 | M | M.SonBORF2355P (97% identity) | M.SbaTMP1ORF2260P | |
| 2265 | inovirus-type Gp2 protein | |||
| 21125 | HGGxSTG domain-containing protein | |||
| 21130 | R | Sli19866ORF2575P (99% identity) | SbaTMP1ORF21150P | |
| 21135 | virulence RhuM family protein | |||
| 21140 | S | S.ScoM318ORF10920P (60% identity) | S2.SbaTMP1ORF21150P | |
| 21145 | S | S1.Sli19866ORF2575P (94% identity) | S1.SbaTMP1ORF21150P | |
| 21150 | M | M.Sli19866ORF2575P (95% identity) | M.SbaTMP1ORF21150P | |
| 21155 | 296 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1600 | AAA family ATPase | |||
| 1605 | M | M.Ssp305ORF570P (100% identity) | GATC | M.SbaTMP1ORF1605P |
| 1610 | DUF2970 domain-containing protein | |||
| 8685 | 76 aa hypothetical protein | |||
| 8690 | M | M.VflV13ORF17560P (67% identity) | M.SbaTMP1ORF8690P | |
| 8695 | 92 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21195 | LysR family transcriptional regulator | |||
| 21200 | R | Sba185ORF360P (98% identity) | SbaTMP1ORF21200P | |
| 21205 | Fic family protein | |||