Escherichia coli B4.H1.17 |
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Putative Escherichia coli B4.H1.17 RM systems
Ref: Rolbiecki,D. unpublished
REBASE ref # 38400
| Sequence length: | GenBank #: | |
| Chromosome: | 5,097,485 bp | CP146555 |
| plasmid pB4.H1.17.c10: | 144,979 bp | CP146554 |
| plasmid pB4.H1.17.c11: | 88,982 bp | CP146553 |
REBASE acronym: EcoH117
Org_num: 76041
All begin V8960_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1835 | TrmB family transcriptional regulator | |||
| 1840 | M | M.Eco39911ORFDP (100% identity) | A | M.EcoH117ORF1840P |
| 1860 | 39 aa hypothetical protein | |||
| 3710 | 60 aa hypothetical protein | |||
| 3715 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoH117ORF3715P | |
| 3720 | DUF977 family protein | |||
| 5825 | drug/metabolite exporter YedA | |||
| 5830 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoH117DcmP |
| 5835 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoH117DcmP |
| 5840 | phosphohydrolase | |||
| 6075 | type II toxin-antitoxin system RelE/ParE family | |||
| 6080 | M | M.Eco35226ORFDP (100% identity) | M.EcoH117ORF6080P | |
| 6085 | TrmB family transcriptional regulator | |||
| 17820 | cell division protein DamX | |||
| 17825 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoH117DamP |
| 17830 | ribulose-phosphate 3-epimerase | |||
| 18445 | DUF2556 family protein | |||
| 18450 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoH117ORF18450P |
| 18455 | DNA-binding transcriptional regulator Fis | |||
| 23395 | 118 aa hypothetical protein | |||
| 23400 | RM | EcoSO40ORF8270P (100% identity) | EcoH117ORF23400P | |
| 23405 | S | S.EcoS792ORF8800P (100% identity) | S.EcoH117ORF23400P | |
| 23410 | DNA methylase | |||
| plasmid pB4.H1.17.c10 | ||||
| 920 | EAL domain-containing protein | |||
| 925 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoH117ORF930P |
| 930 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoH117ORF930P |
| 935 | IS1 family transposase | |||
| plasmid pB4.H1.17.c11 | ||||
| 570 | 73 aa hypothetical protein | |||
| 575 | M | M.EcoC5ORF27415P (99% identity) | M.EcoH117ORF575P | |
| 580 | 79 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26320 | shufflon system plasmid conjugative transfer | |||
| 26325 | R | Eco85I8ORFCP (100% identity) | EcoH117ORF26340P | |
| 26330 | DNA methyltransferase | |||
| 26335 | IS5-like element ISKpn26 family transposase | |||
| 26340 | M | M.Eco253113ORFBP (98% identity) | M.EcoH117ORF26340P | |
| 26345 | SpnT protein | |||