Escherichia coli B1.H1.18 |
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Putative Escherichia coli B1.H1.18 RM systems
Ref: Rolbiecki,D. unpublished
REBASE ref # 38400
| Sequence length: | GenBank #: | |
| Chromosome: | 5,100,110 bp | CP146564 |
| plasmid pB1.H1.18.c1: | 122,589 bp | CP146565 |
REBASE acronym: EcoH118
Org_num: 76039
All begin V8955_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18460 | adenine/cytosine-specific restriction | |||
| 18465 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoH118ORF18470P |
| 18470 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoH118ORF18470P |
| 18475 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoH118ORF18470P |
| 18480 | endoribonuclease SymE | |||
| plasmid pB1.H1.18.c1 | ||||
| 26155 | IS1-like element IS1A family transposase | |||
| 26160 | M | M.SflFF34ORF9300P (60% identity) | M.EcoH118ORF26160P | |
| 26165 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1355 | TrmB family transcriptional regulator | |||
| 1360 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoH118ORF1360P |
| 1380 | 39 aa hypothetical protein | |||
| 5060 | drug/metabolite exporter YedA | |||
| 5065 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoH118DcmP |
| 5070 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.EcoH118DcmP |
| 5075 | phosphohydrolase | |||
| 12405 | DNA-binding transcriptional regulator Fis | |||
| 12410 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoH118ORF12410P |
| 12415 | DUF2556 family protein | |||
| 12935 | ribulose-phosphate 3-epimerase | |||
| 12940 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoH118DamP |
| 12945 | cell division protein DamX | |||
| 14280 | helix-turn-helix transcriptional regulator | |||
| 14285 | M | M.EcosR9ORF575P (100% identity) | M.EcoH118ORF14285P | |
| 14290 | 71 aa hypothetical protein | |||
| plasmid pB1.H1.18.c1 | ||||
| 25630 | IS1 family transposase | |||
| 25635 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoH118ORF25635P |
| 25640 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoH118ORF25635P |
| 25645 | EAL domain-containing protein | |||
| 26095 | 73 aa hypothetical protein | |||
| 26100 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoH118ORF26100P |
| 26105 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18455 | GTPase | |||
| 18460 | R | Ssp28760MrrP (100% identity) | EcoH118MrrP | |
| 18465 | type I restriction-modification system | |||
| 18480 | endoribonuclease SymE | |||
| 18485 | R | SenHNK130McrBP (100% identity) | EcoH118McrBP | |
| 18490 | R | SenHNK130McrCP (100% identity) | EcoH118McrCP | |