Salmonella enterica subsp. enterica serovar Indiana SJTUF14173V2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Indiana SJTUF14173V2 RM systems
Ref: Zhang,Z. and Shi,C. unpublished
REBASE ref # 38475
Complete sequence: 4,835,480 bp
GenBank #: CP145806
REBASE acronym: SenV2
Org_num: 76307
All begin V6Z57_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenV2ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 9385 | DUF87 domain-containing protein | |||
| 9390 | M | M.Sensp14178ORF9330P (100% identity) | M.SenV2ORF9390P | |
| 9395 | integrase domain-containing protein | |||
| 9665 | phosphohydrolase | |||
| 9670 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenV2DcmP |
| 9675 | V | V.Sensp14178DcmP (100% identity) | CCWGG | V.SenV2DcmP |
| 9680 | drug/metabolite exporter YedA | |||
| 20015 | YebC/PmpR family DNA-binding transcriptional | |||
| 20020 | R | Sensp14178ORF19855P (100% identity) | SenV2ORF20020P | |
| 20025 | Wadjet anti-phage system protein JetD | |||
| 20060 | sigma factor-like helix-turn-helix DNA-binding | |||
| 20065 | R | SenMCS4ORF19845P (100% identity) | SenV2ORF20065P | |
| 20070 | malate transporter | |||
| 21540 | RusA family crossover junction | |||
| 21545 | M | M.Sensp14178ORF21370P (100% identity) | GATC | M.SenV2ORF21545P |
| 21550 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9340 | shufflon system plasmid conjugative transfer | |||
| 9345 | R | Sensp14178ORF9290P (100% identity) | CAAACC | SenV2ORF9350P |
| 9350 | M | M.Sensp14178ORF9290P (100% identity) | CAAACC | M.SenV2ORF9350P |
| 9355 | integrase arm-type DNA-binding domain-containing | |||
| 17425 | small effector SsaA | |||
| 17430 | R | Sensp14178ORF17290P (100% identity) | CAGAG | SenV2ORF17435P |
| 17435 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.SenV2ORF17435P |
| 17440 | MFS transporter | |||
| 20100 | S8 family peptidase | |||
| 20105 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenV2ORF20105P |
| 20110 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenV2ORF20105P |
| 20115 | integrase arm-type DNA-binding domain-containing | |||