Escherichia coli S1-SRL-01-C |
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Putative Escherichia coli S1-SRL-01-C RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
Complete sequence: 5,008,994 bp
GenBank #: CP145630
REBASE acronym: Eco01C
Org_num: 76069
All begin V6S45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6120 | IS3-like element IS600 family transposase | |||
| 6125 | S | S2.EcoMEC0001ORF18360P (100% identity) | S2.Eco01CORF6150P | |
| 6130 | R | PmeBin330ORFCP (100% identity) | Eco01CORF6150P | |
| 6135 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 6140 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 6145 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S1.Eco01CORF6150P |
| 6150 | M | M.EcosB2CORFEP (100% identity) | M.Eco01CORF6150P | |
| 6155 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 840 | peptidase | |||
| 845 | R | Fnu048ORFUP (96% identity) | Eco01CORF845P | |
| 850 | HNH endonuclease | |||
| 890 | DEAD/DEAH box helicase | |||
| 895 | RM | Fnu048ORFEP (100% identity) | Eco01CORF895P | |
| 8360 | DUF977 family protein | |||
| 8365 | R | Ecoppa4ORF685P (100% identity) | Eco01CORF8370P | |
| 8370 | M | M.Ecoppa4ORF685P (100% identity) | M.Eco01CORF8370P | |
| 8375 | 92 aa hypothetical protein | |||
| 12365 | drug/metabolite exporter YedA | |||
| 12370 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco01CDcmP |
| 12375 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco01CDcmP |
| 12380 | phosphohydrolase | |||
| 19090 | DNA-binding transcriptional regulator Fis | |||
| 19095 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco01CORF19095P |
| 19100 | DUF2556 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7720 | recombinase family protein | |||
| 7725 | R | EcoSW4848GmrSD2P (100% identity) | Eco01CGmrSDP | |
| 7730 | isocitrate/isopropylmalate family dehydrogenase | |||