Escherichia coli S1-ISR-02-A |
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Putative Escherichia coli S1-ISR-02-A RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
| Sequence length: | GenBank #: | |
| Chromosome: | 5,166,358 bp | CP145636 |
| plasmid p1-S1-ISR-02-A: | 133,043 bp | CP145637 |
| plasmid p2-S1-ISR-02-A: | 86,191 bp | CP145638 |
REBASE acronym: EcoR02A
Org_num: 76060
All begin V6S43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13440 | adenine/cytosine-specific restriction | |||
| 13445 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoR02AORF13450P |
| 13450 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoR02AORF13450P |
| 13455 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoR02AORF13450P |
| 13460 | endoribonuclease SymE | |||
| plasmid p1-S1-ISR-02-A | ||||
| 25930 | IS1-like element IS1A family transposase | |||
| 25935 | M | M.SflFF34ORF9300P (60% identity) | M.EcoR02AORF25935P | |
| 25940 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1095 | phosphohydrolase | |||
| 1100 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.EcoR02ADcmP |
| 1105 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoR02ADcmP |
| 1110 | drug/metabolite exporter YedA | |||
| 5130 | 39 aa hypothetical protein | |||
| 5150 | M | M.EcoUS12ORF13970P (100% identity) | A | M.EcoR02AORF5150P |
| 5155 | TrmB family transcriptional regulator | |||
| 6060 | NinE family protein | |||
| 6065 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoR02AORF6065P |
| 6070 | recombination protein NinB | |||
| 18205 | cell division protein DamX | |||
| 18210 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoR02ADamP |
| 18215 | ribulose-phosphate 3-epimerase | |||
| plasmid p1-S1-ISR-02-A | ||||
| 25335 | IS1 family transposase | |||
| 25340 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoR02AORF25340P |
| 25345 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoR02AORF25340P |
| 25350 | EAL domain-containing protein | |||
| 25870 | 73 aa hypothetical protein | |||
| 25875 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoR02AORF25875P |
| 25880 | 103 aa hypothetical protein | |||
| plasmid p2-S1-ISR-02-A | ||||
| 26095 | 103 aa hypothetical protein | |||
| 26100 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoR02AORF26100P | |
| 26105 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13435 | GTPase | |||
| 13440 | R | Ssp28760MrrP (100% identity) | EcoR02AMrrP | |
| 13445 | type I restriction-modification system | |||
| 13460 | endoribonuclease SymE | |||
| 13465 | R | SenHNK130McrBP (100% identity) | EcoR02AMcrBP | |
| 13470 | R | SenHNK130McrCP (100% identity) | EcoR02AMcrCP | |