Beta proteobacterium TEGF003 |
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Putative Beta proteobacterium TEGF003 RM systems
Ref: Ogata,Y. et al. unpublished
REBASE ref # 35492
Complete sequence: 3,400,574 bp
GenBank #: AP029225
REBASE acronym: Bpr03
Org_num: 76000
All begin TEGF3_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4120 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding | |||
| ??? | R | Lsp63ORF611P (55% identity) | Bpr03ORF4240P | |
| 4150 | 182 aa hypothetical protein | |||
| 4160 | 155 aa hypothetical protein | |||
| 4170 | 199 aa hypothetical protein | |||
| 4180 | DUF262 domain-containing protein | |||
| 4190 | RNA-directed DNA polymerase | |||
| 4200 | S | S.VpaKB5ORF3815P (21% identity) | S.Bpr03ORF4240AP | |
| 4210 | IS3 family transposase | |||
| 4220 | IS3 family transposase | |||
| 4230 | S | S.Amo19171ORF1440P (24% identity) | S.Bpr03ORF4240BP | |
| 4240 | M | M.Lsp63ORF611P (96% identity) | M.Bpr03ORF4240P | |
| 4250 | type II toxin-antitoxin system HipA family | |||
| 13140 | 81 aa hypothetical protein | |||
| 13150 | M | M.Cba4G11ORF3801P (93% identity) | M.Bpr03ORF13150P | |
| 13160 | S | S.PaePb18ORF12525P (52% identity) | S1.Bpr03ORF13150P | |
| 13170 | S | S1.HspBPS33ORF19090P (69% identity) | S2.Bpr03ORF13150P | |
| 13180 | R | Psp8BORF1062P (91% identity) | Bpr03ORF13150P | |
| 13190 | SprT family zinc-dependent metalloprotease | |||
| 14660 | helix-turn-helix domain-containing protein | |||
| 14670 | M | M.CspH1232ORFBP (81% identity) | M.Bpr03ORF14670P | |
| 14680 | S | S.Ecosa7ORFFP (45% identity) | S.Bpr03ORF14670P | |
| 14690 | AAA family ATPase | |||
| 14700 | R | Ave18462ORFEP (91% identity) | Bpr03ORF14670P | |
| 14710 | Hsp20/alpha crystallin family protein | |||
| 15250 | tripartite tricarboxylate transporter substrate | |||
| 15260 | R | SspSC18ORF15425P (78% identity) | Bpr03ORF15360P | |
| 15270 | S | S.AspNA2ORF10780P (32% identity) | S.Bpr03ORF15360P | |
| 15280 | 425 aa hypothetical protein | |||
| 15290 | 178 aa hypothetical protein | |||
| 15300 | transposase | |||
| 15310 | 132 aa hypothetical protein | |||
| 15320 | IS5-like element IS1478 family transposase | |||
| 15330 | 135 aa hypothetical protein | |||
| 15340 | 106 aa hypothetical protein | |||
| 15350 | toxin-antitoxin system toxin component, | |||
| 15360 | M | M.Rsp0813ORF10280P (85% identity) | M.Bpr03ORF15360P | |
| 15370 | 3-5 exonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 70 | ATP-dependent endonuclease | |||
| 80 | RM | Ide30977ORF14115P (76% identity) | Bpr03ORF80P | |
| 90 | Abi family protein | |||
| 14620 | 328 aa hypothetical protein | |||
| 14630 | M | M.PspSHI8ORF23940P (45% identity) | M.Bpr03ORF14630P | |
| 14640 | 276 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11720 | methionine--tRNA ligase | |||
| 11730 | M | M.LspCT6ORF7930P (54% identity) | M.Bpr03ORF11730P | |
| 11740 | nucleotidyltransferase substrate binding | |||
| 11750 | R | Psp3121ORFRP (52% identity) | Bpr03ORF11730P | |
| 11760 | iron-sulfur cluster carrier protein ApbC | |||
| 24210 | MotA/TolQ/ExbB proton channel family protein | |||
| 24220 | R | CcaPHS1ORF1680P (79% identity) | Bpr03ORF24240P | |
| 24230 | 552 aa hypothetical protein | |||
| 24240 | M | M.SspML290ORF8545P (69% identity) | M.Bpr03ORF24240P | |
| 24250 | 228 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11410 | aspartate--tRNA ligase | |||
| 11420 | R | TspOC7MrrP (39% identity) | Bpr03MrrP | |
| 11430 | 138 aa hypothetical protein | |||