Salmonella enterica subsp. enterica serovar 4,[5],12:i:- ZC055 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- ZC055 RM systems
Ref: Tian,Y. unpublished
REBASE ref # 37226
| Sequence length: | GenBank #: | |
| Chromosome: | 5,015,061 bp | CP145533 |
| plasmid pIncHI1B: | 353,748 bp | CP145535 |
REBASE acronym: SenZC055
Org_num: 76305
All begin V2W40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20725 | restriction endonuclease | |||
| 20730 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenZC055ORF20735P |
| 20735 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenZC055ORF20735P |
| 20740 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenZC055ORF20735P |
| 20745 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenZC055DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenZC055ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3230 | DUF2732 family protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenZC055ORF3235P |
| 3240 | replication endonuclease | |||
| 6240 | thermonuclease family protein | |||
| 6245 | M | M.StyCORF187P (49% identity) | M.SenZC055ORF6245P | |
| 6250 | IS6-like element IS26 family transposase | |||
| 6645 | ead/Ea22-like family protein | |||
| 6650 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenZC055ORF6650P |
| 6655 | DUF551 domain-containing protein | |||
| 9995 | PerC family transcriptional regulator | |||
| ??? | M | M.SenceORFKP (100% identity) | M.SenZC055ORF10000P | |
| 10005 | RusA family crossover junction | |||
| 10245 | phosphohydrolase | |||
| 10250 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenZC055DcmP |
| 10255 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenZC055DcmP |
| 10260 | drug/metabolite exporter YedA | |||
| 20885 | BREX system P-loop protein BrxC | |||
| 20890 | RM | StyUK1IV (100% identity) | GATCAG | SenZC055ORF20890P |
| 20895 | AAA family ATPase | |||
| 22375 | LexA family transcriptional regulator | |||
| 22380 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenZC055ORF22380P |
| 22385 | PerC family transcriptional regulator | |||
| plasmid pIncHI1B | ||||
| 24885 | 102 aa hypothetical protein | |||
| 24890 | M | M.PspNIH2ORF21355P (100% identity) | M.SenZC055ORF24890P | |
| 24895 | 203 aa hypothetical protein | |||
| 26060 | IS1 family transposase | |||
| 26065 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.SenZC055ORF26065P |
| 26070 | R | YpsR1ORFAP (100% identity) | CCWGG | SenZC055ORF26065P |
| 26075 | recombinase family protein | |||
| 26235 | 55 aa hypothetical protein | |||
| 26240 | M | M.SenF8025ORFCP (100% identity) | CCWGG | M.SenZC055ORF26240P |
| 26245 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18415 | small effector SsaA | |||
| 18420 | R | StyUK1IP (99% identity) | CAGAG | SenZC055ORF18425P |
| 18425 | M | M.StyUK1I (100% identity) | CAGAG | M.SenZC055ORF18425P |
| 18430 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20720 | BrnT family toxin | |||
| 20725 | R | StyUK1MrrP (100% identity) | SenZC055MrrP | |
| 20730 | type I restriction-modification system | |||
| 20910 | protease Lon-related BREX system protein BrxL | |||
| 20915 | R | StyLTMrrP (100% identity) | SenZC055Mrr2P | |
| 20920 | AAA domain-containing protein | |||