Salmonella enterica subsp. enterica serovar Kentucky SSSE-03 |
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Putative Salmonella enterica subsp. enterica serovar Kentucky SSSE-03 RM systems
Ref: Chaturongakul,S. and Supa-Amornkul,S. unpublished
REBASE ref # 38334
Complete sequence: 4,869,812 bp
GenBank #: CP097853
REBASE acronym: Sen03
Org_num: 75701
All begin NAB19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19880 | 322 aa hypothetical protein | |||
| 19885 | R | SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | Sen03ORF19890P |
| 19890 | M | M.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | M.Sen03ORF19890P |
| 19895 | S | S.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | S.Sen03ORF19890P |
| 19900 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen03ORF2270P |
| 2275 | tyrosine-type recombinase/integrase | |||
| 3270 | DUF2732 domain-containing protein | |||
| 3275 | M | M.SenUA39ORF1528P (100% identity) | GATC | M.Sen03ORF3275P |
| 3280 | replication endonuclease | |||
| 5800 | replication endonuclease | |||
| 5805 | M | M.SenSE01ORF5810P (100% identity) | GATC | M.Sen03ORF5805P |
| 5810 | TraR/DksA family transcriptional regulator | |||
| 7395 | NinE family protein | |||
| 7400 | M | M.SspA292ORF7010P (100% identity) | M.Sen03ORF7400P | |
| 7405 | protein ninF | |||
| 9710 | phosphohydrolase | |||
| 9715 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen03DcmP |
| 9720 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen03DcmP |
| 9725 | drug/metabolite exporter YedA | |||
| 20020 | YebC/PmpR family DNA-binding transcriptional | |||
| 20025 | R | SspA292ORF20185P (100% identity) | Sen03ORF20025P | |
| 20030 | malate transporter | |||
| 20050 | BREX system P-loop protein BrxC | |||
| 20055 | RM | SspA292ORF20215P (100% identity) | GAANCAG | Sen03ORF20055P |
| 20060 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17520 | small effector SsaA | |||
| 17525 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen03ORF17530P |
| 17530 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.Sen03ORF17530P |
| 17535 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20080 | phospholipase D-like domain-containing protein | |||
| 20085 | R | SenTY27MrrP (100% identity) | Sen03MrrP | |
| 20090 | AAA domain-containing protein | |||