Salmonella enterica subsp. enterica serovar Kentucky SSSE-01 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Kentucky SSSE-01 RM systems
Ref: Chaturongakul,S. and Supa-Amornkul,S. unpublished
REBASE ref # 38334
Complete sequence: 4,870,588 bp
GenBank #: CP097849
REBASE acronym: SenSE01
Org_num: 75700
All begin M9201_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19905 | 322 aa hypothetical protein | |||
| 19910 | R | SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | SenSE01ORF19915P |
| 19915 | M | M.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | M.SenSE01ORF19915P |
| 19920 | S | S.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | S.SenSE01ORF19915P |
| 19925 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSE01ORF2270P |
| 2275 | tyrosine-type recombinase/integrase | |||
| 3270 | DUF2732 domain-containing protein | |||
| 3275 | M | M.SenUA39ORF1528P (100% identity) | GATC | M.SenSE01ORF3275P |
| 3280 | replication endonuclease | |||
| 5805 | replication endonuclease | |||
| 5810 | M | M.Sen03ORF5805P (100% identity) | GATC | M.SenSE01ORF5810P |
| 5815 | TraR/DksA family transcriptional regulator | |||
| 7400 | NinE family protein | |||
| 7405 | M | M.SspA292ORF7010P (100% identity) | M.SenSE01ORF7405P | |
| 7410 | protein ninF | |||
| 9720 | phosphohydrolase | |||
| 9725 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSE01DcmP |
| 9730 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenSE01DcmP |
| 9735 | drug/metabolite exporter YedA | |||
| 20045 | YebC/PmpR family DNA-binding transcriptional | |||
| 20050 | R | SspA292ORF20185P (100% identity) | SenSE01ORF20050P | |
| 20055 | malate transporter | |||
| 20075 | BREX system P-loop protein BrxC | |||
| 20080 | RM | SspA292ORF20215P (100% identity) | GAANCAG | SenSE01ORF20080P |
| 20085 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17530 | small effector SsaA | |||
| 17535 | R | SspA292ORF17210P (100% identity) | CAGAG | SenSE01ORF17540P |
| 17540 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.SenSE01ORF17540P |
| 17545 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20105 | phospholipase D-like domain-containing protein | |||
| 20110 | R | SenTY27MrrP (100% identity) | SenSE01MrrP | |
| 20115 | AAA domain-containing protein | |||