Synechococcus elongatus IITB6 |
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Putative Synechococcus elongatus IITB6 RM systems
Ref: Jain,V.S. et al. unpublished
REBASE ref # 38352
| Sequence length: | GenBank #: | |
| Chromosome: | 2,775,312 bp | CP143871 |
| plasmid pIITB6_1: | 50,215 bp | CP143872 |
| plasmid pIITB6_2: | 31,747 bp | CP143873 |
REBASE acronym: SelIITB6
Org_num: 75835
All begin VZG88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pIITB6_2 | ||||
| 14215 | thermonuclease family protein | |||
| 14220 | R | Dac2973ORF2314P (74% identity) | SelIITB6ORF14235P | |
| 14225 | S | S.Pvi13104ORF4370P (54% identity) | S.SelIITB6ORF14235P | |
| 14230 | AAA family ATPase | |||
| 14235 | M | M.McaNorORF1111P (81% identity) | M.SelIITB6ORF14235P | |
| 14240 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pIITB6_1 | ||||
| 13960 | DUF6339 family protein | |||
| 13965 | M | M.SspM161ORF871P (30% identity) | M.SelIITB6ORF13965P | |
| 13970 | Abi family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | type I restriction-modification system subunit M | |||
| 1700 | R | Sel11802ORF9260P (100% identity) | SelIITB6ORF1705P | |
| 1705 | M | M.Sel11802ORF9260P (100% identity) | M.SelIITB6ORF1705P | |
| 1710 | DUF433 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2650 | rod shape-determining protein RodA | |||
| 2655 | R | Sel11802ORF10200P (100% identity) | SelIITB6ORF2655P | |
| 2660 | RpoD/SigA family RNA polymerase sigma factor | |||
| 3505 | response regulator | |||
| 3510 | R | Sel11802MrrP (100% identity) | SelIITB6MrrP | |
| 3515 | cytochrome b6-f complex subunit PetG | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3780 | J domain-containing protein | |||
| 3785 | M | M.Sel11802ORF11315P (100% identity) | M.SelIITB6ORF3785P | |
| 3790 | PQQ-dependent sugar dehydrogenase | |||