Escherichia coli H106 |
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Putative Escherichia coli H106 RM systems
Ref: Wu,Y. unpublished
REBASE ref # 27619
| Sequence length: | GenBank #: | |
| Chromosome: | 4,732,110 bp | CP144364 |
| plasmid pHu106-2: | 256,300 bp | CP144366 |
REBASE acronym: EcoH106
Org_num: 75252
All begin VZC43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3920 | transposase | |||
| 3925 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoH106ORF3930P |
| 3930 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoH106ORF3930P |
| 3935 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoH106ORF3930P |
| 3940 | AAA family ATPase | |||
| 9370 | IS1-like element IS1A family transposase | |||
| 9375 | R | EcosNDM5ORF9185P (100% identity) | EcoH106ORF9375P | |
| 9380 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoH106DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2285 | 26 aa hypothetical protein | |||
| 2290 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoH106ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 9035 | phosphohydrolase | |||
| 9040 | M | M.EcosNDM5DcmP (100% identity) | CCWGG | M.EcoH106DcmP |
| 9045 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoH106DcmP |
| 9050 | drug/metabolite exporter YedA | |||
| 19730 | HNH endonuclease | |||
| 19735 | R | Sso8ORF19860P (100% identity) | EcoH106ORF19735P | |
| 19740 | 55 aa hypothetical protein | |||
| plasmid pHu106-2 | ||||
| 25200 | 48 aa hypothetical protein | |||
| 25205 | M | M.YpsF1ORFBP (100% identity) | M.EcoH106ORF25205P | |
| 25210 | 202 aa hypothetical protein | |||
| 25320 | DNA-binding protein | |||
| 25325 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoH106ORF25325P |
| 25330 | 284 aa hypothetical protein | |||