Streptomyces species SS162 |
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Putative Streptomyces species SS162 RM systems
Ref: Tran,N.H. et al. unpublished
REBASE ref # 38349
Complete sequence: 6,778,597 bp
GenBank #: CP141222
REBASE acronym: SspSS162
Org_num: 75825
All begin U5072_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9660 | 195 aa hypothetical protein | |||
| 9665 | R | Sfr40063ORF5164P (65% identity) | SspSS162ORF9690P | |
| 9670 | 104 aa hypothetical protein | |||
| 9675 | 104 aa hypothetical protein | |||
| 9680 | helix-turn-helix transcriptional regulator | |||
| 9685 | DUF397 domain-containing protein | |||
| 9690 | M | M.Sfr40063ORF5164P (72% identity) | M.SspSS162ORF9690P | |
| 9695 | RloB family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3330 | DUF4913 domain-containing protein | |||
| 3335 | M | M.Ssp1475ORF33340P (93% identity) | M.SspSS162ORF3335P | |
| 3340 | NlpC/P60 family protein | |||
| 3480 | 287 aa hypothetical protein | |||
| 3485 | M | M.Ssp75703ORF7290P (87% identity) | M.SspSS162ORF3485P | |
| 3490 | DnaB-like helicase N-terminal domain-containing | |||
| 7760 | DEAD/DEAH box helicase | |||
| 7765 | RM | Sga8ORF6935P (86% identity) | SspSS162ORF7765P | |
| 7770 | SUKH-4 family immunity protein | |||
| 7850 | restriction endonuclease | |||
| 7855 | M | M.Ssp443ORF9655P (86% identity) | M.SspSS162ORF7855P | |
| 7860 | 64 aa hypothetical protein | |||
| 11215 | 210 aa hypothetical protein | |||
| 11220 | M | M.Sru4426ORF2133P (96% identity) | M.SspSS162ORF11220P | |
| 11225 | DUF4190 domain-containing protein | |||
| 11485 | S41 family peptidase | |||
| 11490 | R | Sfr17ORF11515P (99% identity) | SspSS162ORF11495P | |
| 11495 | M | M.Sfr17ORF11515P (99% identity) | M.SspSS162ORF11495P | |
| 11500 | transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7840 | sigma-70 family RNA polymerase sigma factor | |||
| 7845 | R | Ssp443McrBP (84% identity) | SspSS162McrBP | |
| 7850 | R | Ssp100767McrCP (89% identity) | SspSS162McrCP | |
| 7855 | N-6 DNA methylase | |||
| 11985 | aminotransferase class III-fold pyridoxal | |||
| 11990 | R | Sfr3MrrP (98% identity) | SspSS162MrrP | |
| 11995 | cold shock domain-containing protein | |||
| 17590 | YajQ family cyclic di-GMP-binding protein | |||
| 17600 | R | Sfr17ORF5845P (99% identity) | SspSS162ORF17600P | |
| 17605 | SDR family oxidoreductase | |||