Salmonella enterica subsp. enterica serovar Typhimurium isolate Reference |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium isolate Reference RM systems
Ref: Hendriksen,R. et al. unpublished
REBASE ref # 36348
| Sequence length: | GenBank #: | |
| chromosome GPT21-001_1: | 4,990,774 bp | OY754829 |
| plasmid pGPT21-001_1: | 232,110 bp | OY754830 |
| plasmid pGPT21-001_2: | 133,900 bp | OY754831 |
REBASE acronym: Sence
Org_num: 75712
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome GPT21-001_1 | ||||
| ??? | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenceORFMP |
| ??? | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenceORFMP |
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenceORFMP |
| plasmid pGPT21-001_2 | ||||
| ??? | R | Sen68032ORF19880P (100% identity) | CAAYNNNNNNCTGG | SenceORFJP |
| ??? | S | S.Sen68032ORF19880P (100% identity) | CAAYNNNNNNCTGG | S.SenceORFJP |
| ??? | M | M.Sen33676ORF4987P (100% identity) | CAAYNNNNNNCTGG | M.SenceORFJP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome GPT21-001_1 | ||||
| ??? | M | M.StyTDamP (100% identity) | GATC | M.SenceDamP |
| ??? | M | M.StyUK1III (100% identity) | ATGCAT | M.SenceORFHP |
| ??? | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenceORFIP |
| ??? | M | M.Sen299ORF5635P (100% identity) | M.SenceORFCP | |
| ??? | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenceORFDP |
| ??? | M | M.SenZC055ORF10000P (100% identity) | M.SenceORFKP | |
| ??? | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenceDcmP |
| ??? | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenceDcmP |
| ??? | M | M.SflN101ORF11410P (100% identity) | GATC | M.SenceORFBP |
| ??? | RM | StyUK1IV (100% identity) | GATCAG | SenceORFNP |
| plasmid pGPT21-001_1 | ||||
| ??? | M | M.Sens751ORF24885P (100% identity) | M.SenceORFEP | |
| ??? | M | M.YpsF1ORFBP (100% identity) | M.SenceORFFP | |
| ??? | M | M.YpsF1ORFDP (100% identity) | GATC | M.SenceORFGP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome GPT21-001_1 | ||||
| ??? | R | StyUK1IP (100% identity) | CAGAG | SenceORFLP |
| ??? | M | M.Sen299ORF18010P (100% identity) | CAGAG | M.SenceORFLP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome GPT21-001_1 | ||||
| ??? | R | StyUK1MrrP (100% identity) | SenceMrrP | |