Bifidobacterium pseudocatenulatum DFI.7.61 |
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Putative Bifidobacterium pseudocatenulatum DFI.7.61 RM systems
Ref: Lin,H. et al. unpublished
REBASE ref # 38202
Complete sequence: 2,218,385 bp
GenBank #: CP143938
REBASE acronym: Bps1
Org_num: 75295
All begin V3C17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3825 | 3-5 exonuclease | |||
| 3830 | R | Bps11952ORF3905P (99% identity) | Bps1ORF3835P | |
| 3835 | M | M.Bps11952ORF3905P (100% identity) | M.Bps1ORF3835P | |
| 3840 | S | S1.Bps11952ORF3905P (46% identity) | S1.Bps1ORF3835P | |
| 3845 | S | S2.Bbr4321ORF1561P (95% identity) | S2.Bps1ORF3835P | |
| 3850 | site-specific tyrosine recombinase/integron | |||
| 3855 | S | S3.Bka15439ORF782P (80% identity) | S3.Bps1ORF3835P | |
| 3860 | D-hexose-6-phosphate mutarotase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5800 | type II toxin-antitoxin system RelB/DinJ family | |||
| 5805 | M | M.Bps20438ORF772P (100% identity) | GACNNNGTC | M.Bps1ORF5805P |
| 5810 | 310 aa hypothetical protein | |||
| 7635 | type II toxin-antitoxin system RelB/DinJ family | |||
| 7640 | M | M.Bps20438ORF772P (100% identity) | GACNNNGTC | M.Bps1ORF7640P |
| 7645 | 310 aa hypothetical protein | |||
| 7870 | type II toxin-antitoxin system RelB/DinJ family | |||
| 7875 | M | M.Bps20438ORF772P (100% identity) | GACNNNGTC | M.Bps1ORF7875P |
| 7880 | 310 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7280 | NUDIX domain-containing protein | |||
| 7285 | R | PmeBin293ORFAP (7% identity) | Bps1ORF7285AP | |
| 7290 | RNA-guided endonuclease TnpB family protein | |||
| 7295 | IS200/IS605 family transposase | |||
| 7300 | R | Bps11027ORF8530P (18% identity) | Bps1ORF7285BP | |
| 7305 | R | Bps11027ORF8530P (71% identity) | Bps1ORF7285CP | |
| 7310 | glycerophosphodiester phosphodiesterase | |||