Escherichia coli PNUSAE147328 |
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Putative Escherichia coli PNUSAE147328 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 5,458,822 bp | CP143968 |
| plasmid unnamed1: | 92,740 bp | CP143969 |
REBASE acronym: Eco328
Org_num: 75258
All begin V2J05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23940 | DUF262 domain-containing protein | |||
| 23945 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco328ORF23950P |
| 23950 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco328ORF23950P |
| 23955 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco328ORF23950P |
| 23960 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2595 | DUF2556 family protein | |||
| 2600 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco328ORF2600P |
| 2605 | DNA-binding transcriptional regulator Fis | |||
| 8565 | recombination protein NinB | |||
| 8570 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco328ORF8570P |
| 8575 | NinE family protein | |||
| 9960 | phosphohydrolase | |||
| 9965 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco328DcmP |
| 9970 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco328DcmP |
| 9975 | drug/metabolite exporter YedA | |||
| 13775 | DUF1367 family protein | |||
| 13780 | R | Ecos15739ORF2910P (100% identity) | Eco328ORF13790P | |
| 13785 | O-methyltransferase | |||
| 13790 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco328ORF13790P | |
| 13795 | 35 aa hypothetical protein | |||
| 14665 | DUF6645 domain-containing protein | |||
| 14680 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco328ORF14680P | |
| 14685 | TrmB family transcriptional regulator | |||
| 17590 | NinE family protein | |||
| 17595 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco328ORF17595P |
| 17600 | recombination protein NinB | |||
| 24180 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco328ORF24180P |
| 24185 | DEAD/DEAH box helicase | |||
| 24215 | N-acetylneuraminic acid mutarotase | |||
| 24220 | R | Ecos1613ORF26795P (100% identity) | Eco328ORF24220P | |
| 24225 | transposase | |||
| plasmid unnamed1 | ||||
| 27500 | 101 aa hypothetical protein | |||
| 27505 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco328ORF27505P | |
| 27510 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23960 | endoribonuclease SymE | |||
| ??? | R | EcosPA8GmrSDP (100% identity) | Eco328GmrSDP | |
| 23975 | cytoplasmic protein | |||