Streptomyces species NBC_00820 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptomyces species NBC_00820 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
Complete sequence: 8,106,388 bp
GenBank #: CP108882
REBASE acronym: Ssp820
Org_num: 75805
All begin OIB37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21075 | bifunctional uroporphyrinogen-III | |||
| ??? | M | M.Ssp557ORF15295P (31% identity) | M.Ssp820ORFAP | |
| 21090 | DUF397 domain-containing protein | |||
| 30080 | EcsC family protein | |||
| 30085 | R | SspEN27ORFEP (83% identity) | Ssp820ORF30100P | |
| 30090 | S | S1.Ssp820ORF30100P (46% identity) | S2.Ssp820ORF30100P | |
| 30095 | S | S.Ssp26508ORF6067P (45% identity) | S1.Ssp820ORF30100P | |
| 30100 | M | M2.Ssp142ORF2212P (89% identity) | M2.Ssp820ORF30100P | |
| 30105 | M | M1.SspHUAS5ORF4320P (75% identity) | M1.Ssp820ORF30100P | |
| 30110 | 196 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11000 | DUF5655 domain-containing protein | |||
| 11005 | M | M.Ssp601ORF1410P (95% identity) | M.Ssp820ORF11005P | |
| 11010 | C40 family peptidase | |||
| 14745 | SEC-C domain-containing protein | |||
| 14750 | V | V.Ssp75703ORF19435P (71% identity) | V.Ssp820ORF14770P | |
| 14755 | helix-turn-helix domain-containing protein | |||
| 14760 | 325 aa hypothetical protein | |||
| 14765 | DUF6339 family protein | |||
| 14770 | M | M2.Ssp37ORF23245P (74% identity) | M1.Ssp820ORF14770P | |
| 14775 | M | M1.Ssp37ORF23245P (75% identity) | M2.Ssp820ORF14770P | |
| 14780 | Z1 domain-containing protein | |||
| 16015 | 223 aa hypothetical protein | |||
| 16020 | M | M.Sps98ORF25700P (82% identity) | M.Ssp820ORF16020P | |
| 16025 | 226 aa hypothetical protein | |||
| 28135 | formyltransferase family protein | |||
| 28140 | M | M.Seu01735ORF13495P (81% identity) | M.Ssp820ORF28140P | |
| 28145 | UvrD-helicase domain-containing protein | |||
| 28255 | EcsC family protein | |||
| ??? | RM | SspS501ORF25480P (75% identity) | Ssp820ORF28260P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 28145 | UvrD-helicase domain-containing protein | |||
| 28150 | R | Ssp100767McrCP (82% identity) | Ssp820McrCP | |
| 28155 | R | Shi01753McrBP (83% identity) | Ssp820McrBP | |
| 28160 | sigma-70 family RNA polymerase sigma factor | |||