Salmonella enterica subsp. enterica serovar Newport DC_10-446 |
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Putative Salmonella enterica subsp. enterica serovar Newport DC_10-446 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 38014
Complete sequence: 4,882,754 bp
GenBank #: CP140748
REBASE acronym: Sen446
Org_num: 75708
All begin SM154_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20710 | 3-5 exonuclease | |||
| 20715 | S | S.Sens29927ORF20150P (100% identity) | S1.Sen446ORF20720P | |
| 20720 | M | M2.SenXORF20095P (100% identity) | M2.Sen446ORF20720P | |
| 20725 | 44 aa hypothetical protein | |||
| 20730 | restriction endonuclease | |||
| 20735 | M | M.Sens29927ORF20165P (100% identity) | M1.Sen446ORF20720P | |
| 20740 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S2.Sen446ORF20720P |
| 20745 | R | Sens29927ORF20165P (100% identity) | Sen446ORF20720P | |
| 20750 | DUF5655 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2430 | DUF2556 family protein | |||
| 2435 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen446ORF2435P |
| 2440 | DNA-binding transcriptional regulator Fis | |||
| 9650 | PerC family transcriptional regulator | |||
| 9655 | M | M.StyUK1V (100% identity) | GATC | M.Sen446ORF9655P |
| 9660 | RusA family crossover junction | |||
| 9890 | phosphohydrolase | |||
| 9895 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen446DcmP |
| 9900 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen446DcmP |
| 9905 | drug/metabolite exporter YedA | |||
| 20860 | YebC/PmpR family DNA-binding transcriptional | |||
| 20865 | R | SenXORF20240P (100% identity) | Sen446ORF20865P | |
| 20870 | 204 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18440 | small effector SsaA | |||
| 18445 | R | Sens29927ORF17960P (100% identity) | CAGAG | Sen446ORF18450P |
| 18450 | M | M.SenTTBORF5430P (100% identity) | CAGAG | M.Sen446ORF18450P |
| 18455 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20725 | 44 aa hypothetical protein | |||
| 20730 | R | SenTTBMrrP (100% identity) | Sen446MrrP | |
| 20735 | class I SAM-dependent DNA methyltransferase | |||