Salmonella enterica subsp. enterica serovar Newport CFSAN003353 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN003353 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 38014
Complete sequence: 4,883,883 bp
GenBank #: CP140737
REBASE acronym: Sen3353
Org_num: 75706
All begin AIN32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20715 | 3-5 exonuclease | |||
| 20720 | S | S.Sens29927ORF20150P (100% identity) | S1.Sen3353ORF20725P | |
| 20725 | M | M2.SenXORF20095P (100% identity) | M2.Sen3353ORF20725P | |
| 20730 | 44 aa hypothetical protein | |||
| 20735 | restriction endonuclease | |||
| 20740 | M | M.Sens29927ORF20165P (100% identity) | M1.Sen3353ORF20725P | |
| 20745 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S2.Sen3353ORF20725P |
| 20750 | R | Sens29927ORF20165P (100% identity) | Sen3353ORF20725P | |
| 20755 | DUF5655 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2430 | DUF2556 family protein | |||
| 2435 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3353ORF2435P |
| 2440 | DNA-binding transcriptional regulator Fis | |||
| 9660 | PerC family transcriptional regulator | |||
| 9665 | M | M.StyUK1V (100% identity) | GATC | M.Sen3353ORF9665P |
| 9670 | RusA family crossover junction | |||
| 9900 | phosphohydrolase | |||
| 9905 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen3353DcmP |
| 9910 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen3353DcmP |
| 9915 | drug/metabolite exporter YedA | |||
| 20865 | YebC/PmpR family DNA-binding transcriptional | |||
| 20870 | R | SenXORF20240P (100% identity) | Sen3353ORF20870P | |
| 20875 | 204 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18445 | small effector SsaA | |||
| 18450 | R | Sens29927ORF17960P (100% identity) | CAGAG | Sen3353ORF18455P |
| 18455 | M | M.SenTTBORF5430P (100% identity) | CAGAG | M.Sen3353ORF18455P |
| 18460 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20730 | 44 aa hypothetical protein | |||
| 20735 | R | SenTTBMrrP (100% identity) | Sen3353MrrP | |
| 20740 | class I SAM-dependent DNA methyltransferase | |||