Streptomyces species NBC_00576 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptomyces species NBC_00576 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
Complete sequence: 10,919,009 bp
GenBank #: CP107780
REBASE acronym: Ssp576
Org_num: 75799
All begin OG734_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19480 | 757 aa hypothetical protein | |||
| 19485 | R | Ssp079ORF24465P (97% identity) | Ssp576ORF19495P | |
| 19490 | S | S.Ssp079ORF24465P (97% identity) | S.Ssp576ORF19495P | |
| 19495 | M | M.Ssp079ORF24465P (95% identity) | M.Ssp576ORF19495P | |
| 19500 | endonuclease/exonuclease/phosphatase family | |||
| 26420 | 63 aa hypothetical protein | |||
| 26425 | M | M.San516ORF19140P (62% identity) | M2.Ssp576ORF26425P | |
| 26430 | S | S.SspM2AORFEP (67% identity) | S1.Ssp576ORF26425P | |
| 26435 | aminotransferase class I/II-fold pyridoxal | |||
| 26440 | 418 aa hypothetical protein | |||
| 26445 | R | Ssp538ORF18780P (97% identity) | Ssp576ORF26425P | |
| 26450 | S | S.Ssp33ORF20665P (39% identity) | S2.Ssp576ORF26425P | |
| 26455 | M | M.Ssp538ORF18780BP (96% identity) | M1.Ssp576ORF26425P | |
| 26460 | 713 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3980 | 93 aa hypothetical protein | |||
| 3985 | M | M.Sca60ORF8945P (80% identity) | M.Ssp576ORF3985P | |
| 3990 | replicative DNA helicase | |||
| 5015 | AAA family ATPase | |||
| 5020 | M | M.Ssp340ORF6095P (91% identity) | M.Ssp576ORF5020P | |
| 5025 | TIGR02679 family protein | |||
| 18040 | 216 aa hypothetical protein | |||
| 18045 | M | M.Ssp1390ORF34105P (94% identity) | M.Ssp576ORF18045P | |
| 18050 | 269 aa hypothetical protein | |||
| 29725 | bifunctional DNA primase/polymerase | |||
| 29730 | M | M.Ssp558ORF29095P (86% identity) | M.Ssp576ORF29730P | |
| 29735 | 102 aa hypothetical protein | |||
| 30860 | ATP-binding protein | |||
| 30865 | M | M2.Ssp280ORF17945P (95% identity) | M1.Ssp576ORF30865P | |
| 30870 | M | M1.Ssp280ORF17945P (98% identity) | M2.Ssp576ORF30865P | |
| 30875 | DUF6339 family protein | |||
| 30880 | 299 aa hypothetical protein | |||
| 30885 | 664 aa hypothetical protein | |||
| 30890 | PD-(D/E)XK motif protein | |||
| 30895 | Z1 domain-containing protein | |||
| 30900 | V | V.Ssp280ORF17945P (94% identity) | V.Ssp576ORF30865P | |
| 30905 | LysR family transcriptional regulator | |||
| 35425 | AAA family ATPase | |||
| 35430 | RM | Sca60ORF35080P (88% identity) | Ssp576ORF35430P | |
| 35435 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4980 | PIN domain-containing protein | |||
| ??? | R | Sam40697McrBP (75% identity) | Ssp576McrBP | |
| 4990 | R | Seu4McrCP (85% identity) | Ssp576McrCP | |
| 4995 | VapC toxin family PIN domain ribonuclease | |||
| 5000 | DUF2786 domain-containing protein | |||
| 5005 | R | Ssc87McrB2P (91% identity) | Ssp576McrB2P | |
| 5010 | R | Ssp340McrCP (92% identity) | Ssp576McrC2P | |
| 5015 | AAA family ATPase | |||
| 5845 | 154 aa hypothetical protein | |||
| 5850 | R | Seu1MrrP (95% identity) | Ssp576MrrP | |
| 5855 | 100 aa hypothetical protein | |||
| 35310 | 130 aa hypothetical protein | |||
| 35315 | R | Ssp77GmrSDP (93% identity) | Ssp576GmrSDP | |
| 35320 | AAA family ATPase | |||