Shewanella oncorhynchi B |
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Putative Shewanella oncorhynchi B RM systems
Ref: Jia,Z. and Jia,S. unpublished
REBASE ref # 38317
Complete sequence: 4,985,169 bp
GenBank #: CP143431
REBASE acronym: SonB
Org_num: 75716
All begin VR487_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2320 | SprT family zinc-dependent metalloprotease | |||
| 2325 | R | Sba128ORFGP (98% identity) | SonBORF2355P | |
| 2330 | 52 aa hypothetical protein | |||
| 2335 | 40 aa hypothetical protein | |||
| 2340 | 397 aa hypothetical protein | |||
| 2345 | RhuM family protein | |||
| 2350 | S | S.Ssp1617ORF10025P (55% identity) | S.SonBORF2355P | |
| 2355 | M | M.SbaTMP1ORF2260P (97% identity) | M.SonBORF2355P | |
| 2360 | inovirus-type Gp2 protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1420 | AAA family ATPase | |||
| 1425 | M | M.SonZP2DamP (99% identity) | GATC | M.SonBDamP |
| 1430 | DUF2970 domain-containing protein | |||
| 11760 | DNA phosphorothioation-associated putative | |||
| 11765 | M | M.Sba10735DndBP (100% identity) | M.SonBDndBP | |
| 11770 | DNA phosphorothioation system sulfurtransferase | |||
| 11765 | DNA sulfur modification protein DndB | |||
| 11770 | M | M.Sba10735DndCP (100% identity) | M.SonBDndCP | |
| 11775 | DNA sulfur modification protein DndD | |||
| 11770 | DNA phosphorothioation system sulfurtransferase | |||
| 11775 | M | M.Sba10735DndDP (98% identity) | M.SonBDndDP | |
| 11780 | DNA sulfur modification protein DndE | |||
| 11775 | DNA sulfur modification protein DndD | |||
| 11780 | M | M.Sba10735DndEP (88% identity) | M.SonBDndEP | |
| 11785 | DUF262 domain-containing HNH endonuclease family | |||
| 11790 | restriction endonuclease | |||
| 11795 | R | Sba10735DptHP (99% identity) | SonBDptHP | |
| 11800 | DNA phosphorothioation-dependent restriction | |||
| 11795 | DNA phosphorothioation-dependent restriction | |||
| 11800 | R | Sba10735DptGP (100% identity) | SonBDptGP | |
| 11805 | DNA phosphorothioation-dependent restriction | |||
| 11800 | DNA phosphorothioation-dependent restriction | |||
| 11805 | R | Sba10735DptFP (99% identity) | SonBDptFP | |
| 11810 | MerR family transcriptional regulator | |||
| 19790 | restriction endonuclease | |||
| 19795 | M | M.HspKG2ORF20120P (74% identity) | M.SonBORF19795P | |
| 19800 | Fic family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11785 | DUF262 domain-containing HNH endonuclease family | |||
| 11790 | R | Vha1792Mrr2P (71% identity) | SonBMrrP | |