Cetobacterium somerae ceto |
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Putative Cetobacterium somerae ceto RM systems
Ref: Wang,S. and Li,M. unpublished
REBASE ref # 38238
| Sequence length: | GenBank #: | |
| Chromosome: | 2,048,806 bp | CP143319 |
| plasmid p3: | 188,661 bp | CP143322 |
| plasmid p6: | 48,021 bp | CP143325 |
| plasmid p7: | 45,655 bp | CP143326 |
REBASE acronym: Csoceto
Org_num: 75313
All begin VSU16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2510 | class I SAM-dependent methyltransferase | |||
| 2515 | S | S1.CsoBJORFAP (94% identity) | S1.CsocetoORF2520P | |
| 2520 | M | M.CsoBJORFAP (97% identity) | M.CsocetoORF2520P | |
| 2525 | virulence protein RhuM/Fic/DOC family protein | |||
| 2530 | S | S2.CsoBJORFAP (95% identity) | S2.CsocetoORF2520P | |
| 2535 | 272 aa hypothetical protein | |||
| 2540 | R | CsoBJORFAP (94% identity) | CsocetoORF2520P | |
| 2545 | SprT family zinc-dependent metalloprotease | |||
| plasmid p3 | ||||
| 14725 | FRG domain-containing protein | |||
| 14730 | S | S.ScrFORF5270P (28% identity) | S.CsocetoORF14735P | |
| 14735 | M | M.CsocetoORF16485P (93% identity) | M.CsocetoORF14735P | |
| 14740 | R | CsocetoORF16485P (75% identity) | CsocetoORF14735P | |
| plasmid p6 | ||||
| 16265 | HlyD family secretion protein | |||
| 16270 | S | S.EhaEH1ORF1742P (55% identity) | S2.CsocetoORF16325P | |
| 16275 | recombinase family protein | |||
| 16280 | GNAT family N-acetyltransferase | |||
| 16285 | 242 aa hypothetical protein | |||
| 16290 | 143 aa hypothetical protein | |||
| 16295 | R | CspCT4ORF6465P (50% identity) | CsocetoORF16325P | |
| 16300 | 209 aa hypothetical protein | |||
| 16305 | nucleotidyltransferase domain-containing | |||
| 16310 | RepB family plasmid replication initiator | |||
| 16315 | 168 aa hypothetical protein | |||
| 16320 | S | S.WspWK01ORF17260P (37% identity) | S1.CsocetoORF16325P | |
| 16325 | M | M.Spe19205ORF10940P (74% identity) | M.CsocetoORF16325P | |
| 16330 | PC4/YdbC family ssDNA-binding protein | |||
| plasmid p7 | ||||
| 16695 | 60 aa hypothetical protein | |||
| 16480 | R | CsocetoORF14735P (75% identity) | CsocetoORF16485P | |
| 16485 | M | M.CsocetoORF14735P (93% identity) | M.CsocetoORF16485P | |
| 16490 | PDDEXK nuclease domain-containing protein | |||
| 16495 | S | S.DfeORF5245P (38% identity) | S1.CsocetoORF16485P | |
| 16500 | TerB N-terminal domain-containing protein | |||
| 16505 | ATP-binding protein | |||
| 16510 | DEAD/DEAH box helicase | |||
| 16515 | recombinase family protein | |||
| 16520 | S | S2.Aps702ORF10865P (60% identity) | S2.CsocetoORF16485P | |
| 16525 | type II toxin-antitoxin system HicA family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3420 | ParB/Srx family N-terminal domain-containing | |||
| 3425 | M | M.CsocetoORF5215P (45% identity) | M.CsocetoORF3425P | |
| 3430 | phage/plasmid replication protein | |||
| 5210 | 68 aa hypothetical protein | |||
| 5215 | M | M.CsocetoORF3425P (45% identity) | M.CsocetoORF5215P | |
| 5220 | N-acetylmuramoyl-L-alanine amidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4125 | Mrp/NBP35 family ATP-binding protein | |||
| 4130 | R | CsoBJORFDP (94% identity) | CsocetoORF4130P | |
| 4135 | sigma-70 family RNA polymerase sigma factor | |||
| 8000 | (deoxy)nucleoside triphosphate | |||
| 8005 | R | Cve12966ORF226P (40% identity) | CsocetoORF8005P | |
| 8010 | glucuronate isomerase | |||