Escherichia coli EC190329 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EC190329 RM systems
Ref: Maguire,M. unpublished
REBASE ref # 38210
Complete sequence: 5,137,970 bp
GenBank #: CP142949
REBASE acronym: Eco0329
Org_num: 75247
All begin VYI52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21100 | adenine/cytosine-specific restriction | |||
| 21105 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco0329ORF21110P |
| 21110 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco0329ORF21110P |
| 21115 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco0329ORF21110P |
| 21120 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1880 | cell division protein DamX | |||
| 1885 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0329DamP |
| 1890 | ribulose-phosphate 3-epimerase | |||
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco0329ORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 8390 | replication endonuclease | |||
| 8395 | M | M.Sbo812ORFEP (100% identity) | M.Eco0329ORF8395P | |
| 8400 | O-methyltransferase | |||
| 8405 | R | EcosEC21ORF7960P (100% identity) | Eco0329ORF8395P | |
| 8410 | phage portal protein | |||
| 9355 | HD domain-containing protein | |||
| 9360 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco0329DcmP |
| 9365 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco0329DcmP |
| 9370 | drug/metabolite exporter YedA | |||
| 15640 | NinE family protein | |||
| 15645 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco0329ORF15645P |
| 15650 | recombination protein NinB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21095 | GTPase | |||
| 21100 | R | EcosS1MrrP (100% identity) | Eco0329MrrP | |
| 21105 | type I restriction-modification system | |||