Escherichia coli EC200461 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EC200461 RM systems
Ref: Maguire,M. unpublished
REBASE ref # 38210
Complete sequence: 5,044,154 bp
GenBank #: CP142956
REBASE acronym: Eco461
Org_num: 75250
All begin VYI50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10050 | IS3 family transposase | |||
| 10055 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco461ORF10055P |
| 10060 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco461ORF10055P |
| 10065 | YecA family protein | |||
| 10070 | cold shock domain-containing protein | |||
| 10075 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco461ORF10055P |
| 10080 | SprT family zinc-dependent metalloprotease | |||
| 20325 | adenine/cytosine-specific restriction | |||
| 20330 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco461ORF20335P |
| 20335 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco461ORF20335P |
| 20340 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco461ORF20335P |
| 20345 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2345 | DUF2556 family protein | |||
| 2350 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco461ORF2350P |
| 2355 | DNA-binding transcriptional regulator Fis | |||
| 9785 | phosphohydrolase | |||
| 9790 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco461DcmP |
| 9795 | V | V.Ecos142DcmP (100% identity) | V.Eco461DcmP | |
| 9800 | drug/metabolite exporter YedA | |||
| 15430 | replication endonuclease | |||
| 15435 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco461ORF15435P |
| 15440 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20320 | GTPase | |||
| 20325 | R | Ssp28760MrrP (100% identity) | Eco461MrrP | |
| 20330 | type I restriction-modification system | |||
| 20345 | endoribonuclease SymE | |||
| 20350 | R | SenHNK130McrBP (100% identity) | Eco461McrBP | |
| 20355 | R | SenHNK130McrCP (100% identity) | Eco461McrCP | |