Citrobacter freundii B18196 |
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Putative Citrobacter freundii B18196 RM systems
Ref: Maguire,M. unpublished
REBASE ref # 38210
| Sequence length: | GenBank #: | |
| Chromosome: | 5,156,024 bp | CP142904 |
| plasmid pB18196_1: | 197,775 bp | CP142905 |
| plasmid pB18196_2: | 444,144 bp | CP142906 |
REBASE acronym: Cfr96
Org_num: 75316
All begin VYI60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12885 | SprT family zinc-dependent metalloprotease | |||
| 12890 | R | CpoF2221ORF10925P (100% identity) | CTCANNNNNNRTAY | Cfr96ORF12910P |
| 12895 | cold shock domain-containing protein | |||
| 12900 | YecA family protein | |||
| 12905 | S | S1.Cyo1ORFFP (100% identity) | CTCANNNNNNRTAY | S.Cfr96ORF12910P |
| 12910 | M | M.Cyo1ORFFP (100% identity) | CTCANNNNNNRTAY | M.Cfr96ORF12910P |
| 12915 | 410 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1935 | cell division protein DamX | |||
| 1940 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr96DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 2480 | DUF2556 family protein | |||
| 2485 | M | M.CfrZS47ORF2675P (100% identity) | ATGCAT | M.Cfr96ORF2485P |
| 2490 | DNA-binding transcriptional regulator Fis | |||
| 8130 | DUF4222 domain-containing protein | |||
| 8135 | M | M.Cfr67ORF8510P (100% identity) | M.Cfr96ORF8135P | |
| 8140 | TraR/DksA family transcriptional regulator | |||
| 8145 | 72 aa hypothetical protein | |||
| 8150 | M | M.CpoK218ORF6910P (99% identity) | M.Cfr96ORF8150P | |
| 8155 | 94 aa hypothetical protein | |||
| 10000 | 102 aa hypothetical protein | |||
| 10005 | M | M.Psp250ORFAP (56% identity) | M.Cfr96ORF10005P | |
| 10010 | 119 aa hypothetical protein | |||
| 12525 | RusA family crossover junction | |||
| 12530 | M | M.CfrB38ORF1058P (93% identity) | M.Cfr96ORF12530P | |
| 12535 | conserved phage C-terminal domain-containing | |||
| 13190 | drug/metabolite exporter YedA | |||
| 13195 | V | V.CfrZS47ORF10210P (100% identity) | V.Cfr96ORF13200P | |
| 13200 | M | M.CfrZS47ORF10210P (100% identity) | CCWGG | M.Cfr96ORF13200P |
| 13205 | phosphohydrolase | |||
| 15315 | 72 aa hypothetical protein | |||
| 15320 | M | M.CfrZS47ORF7815P (100% identity) | M.Cfr96ORF15320P | |
| 15325 | 147 aa hypothetical protein | |||
| 16205 | DnaT-like ssDNA-binding domain-containing | |||
| 16210 | M | M.Cfr67ORF16230P (100% identity) | M.Cfr96ORF16210P | |
| 16215 | 67 aa hypothetical protein | |||
| 16280 | 75 aa hypothetical protein | |||
| 16285 | M | M.Cfr67ORF16305P (100% identity) | M.Cfr96ORF16285P | |
| 16290 | 83 aa hypothetical protein | |||
| 21855 | endoribonuclease SymE | |||
| 21860 | R | Cfri0ORF4248P (98% identity) | Cfr96ORF21860P | |
| 21865 | tyrosine-type recombinase/integrase | |||
| plasmid pB18196_1 | ||||
| 26235 | 73 aa hypothetical protein | |||
| 26240 | M | M.Kpni11ayORF5166P (100% identity) | M.Cfr96ORF26240P | |
| 26245 | SOS response-associated peptidase family | |||
| 26265 | tyrosine-type recombinase/integrase | |||
| 26270 | R | Kpn9645ORFAP (100% identity) | CCWGG | Cfr96ORF26275P |
| 26275 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M.Cfr96ORF26275P |
| 26280 | AAA family ATPase | |||
| plasmid pB18196_2 | ||||
| 28190 | 102 aa hypothetical protein | |||
| 28195 | M | M.SenF8025ORFAP (86% identity) | M.Cfr96ORF28195P | |
| 28200 | 203 aa hypothetical protein | |||
| 28560 | DNA-binding protein | |||
| 28565 | M | M1.SenF8025ORFBP (100% identity) | M.Cfr96ORF28565P | |
| 28570 | 273 aa hypothetical protein | |||