Pseudomonas aeruginosa F002 |
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Putative Pseudomonas aeruginosa F002 RM systems
Ref: Kyrkou,I. et al. unpublished
REBASE ref # 38188
Complete sequence: 7,076,089 bp
GenBank #: CP115481
REBASE acronym: PaeF002
Org_num: 75627
All begin PCP56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 350 | DUF262 domain-containing HNH endonuclease family | |||
| 355 | S | S.PaePAD8ORF12875P (66% identity) | S.PaeF002ORF360P | |
| 360 | M | M.PaePAD8ORF12875P (99% identity) | M.PaeF002ORF360P | |
| 365 | HNH endonuclease signature motif containing | |||
| 370 | R | PaesAG1ORF6375P (100% identity) | PaeF002ORF360P | |
| 375 | peptidase M15 | |||
| 20575 | recombinase family protein | |||
| 20580 | R | PspCCA1ORFAP (99% identity) | PaeF002ORF20590P | |
| 20585 | S | S.Pas1ORF19430P (58% identity) | S.PaeF002ORF20590P | |
| 20590 | M | M.PaeLo422ORF18575P (94% identity) | M.PaeF002ORF20590P | |
| 20595 | antA/AntB antirepressor family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6040 | DHA2 family efflux MFS transporter permease | |||
| 6050 | M | M.Pae26023ORF29660P (100% identity) | M.PaeF002ORF6050P | |
| 6055 | phage portal protein | |||
| 9815 | 94 aa hypothetical protein | |||
| 9820 | M | M.PaesS1ORF1335P (99% identity) | M.PaeF002ORF9820P | |
| 9825 | V | V.PaesS1ORF1335P (100% identity) | V.PaeF002ORF9820P | |
| 9830 | DISARM system phospholipase D-like protein DrmC | |||
| 9840 | DISARM system helicase DrmA | |||
| 9845 | RM | PaeLYT4ORFDP (81% identity) | PaeF002ORF9845P | |
| 9850 | DISARM system SNF2-like helicase DrmD | |||
| 21685 | 912 aa hypothetical protein | |||
| 21690 | M | M.PaesS1ORF11530P (83% identity) | M.PaeF002ORF21690P | |
| 21695 | transposase | |||
| 22700 | 67 aa hypothetical protein | |||
| 22705 | M | M.Pae8203ORF5079P (27% identity) | M.PaeF002ORF22705AP | |
| 22710 | M | M.PaeAES1RORF19640P (100% identity) | M.PaeF002ORF22705BP | |
| 22715 | 265 aa hypothetical protein | |||
| 23020 | 57 aa hypothetical protein | |||
| 23025 | M | M.PaeR11ORF12365P (99% identity) | M1.PaeF002ORF23025P | |
| 23030 | M | M.Pae583ORF12110P (100% identity) | M2.PaeF002ORF23025P | |
| 23035 | AAA family ATPase | |||
| 27940 | 56 aa hypothetical protein | |||
| ??? | M | M.PaeSE24ORF14645P (99% identity) | M.PaeF002ORFAP | |
| 27950 | 47 aa hypothetical protein | |||
| 32325 | 182 aa hypothetical protein | |||
| ??? | M | M.PaePAS6ORF23800P (99% identity) | M.PaeF002ORFBP | |
| 32335 | 47 aa hypothetical protein | |||