Pseudomonas aeruginosa F016 |
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Putative Pseudomonas aeruginosa F016 RM systems
Ref: Kyrkou,I. et al. unpublished
REBASE ref # 38188
Complete sequence: 6,967,501 bp
GenBank #: CP115273
REBASE acronym: PaeF016
Org_num: 75630
All begin PCP24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4600 | restriction endonuclease | |||
| 4605 | M | M.PspAK6UORFGP (100% identity) | AAGNNNNNNCTGG | M.PaeF016ORF4605P |
| 4610 | 270 aa hypothetical protein | |||
| 4615 | AAA family ATPase | |||
| 4620 | S | S.PaeRN21ORF2494P (100% identity) | AAGNNNNNNCTGG | S.PaeF016ORF4605P |
| 4625 | R | PaeRN21ORF2494P (100% identity) | AAGNNNNNNCTGG | PaeF016ORF4605P |
| 4630 | tyrosine-type recombinase/integrase | |||
| 15935 | AAA family ATPase | |||
| 15940 | S | S.Psp8999ORF59750P (100% identity) | S.PaeF016ORF15945P | |
| 15945 | M | M.Psp8999ORF59750P (100% identity) | M.PaeF016ORF15945P | |
| 15950 | DNA recombination protein RmuC | |||
| 15955 | R | Psp8999ORF59750P (99% identity) | PaeF016ORF15945P | |
| 15960 | sigma 54-interacting transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5385 | DNA topoisomerase III | |||
| 5390 | M | M.Ssp405ORF8290P (100% identity) | M.PaeF016ORF5390P | |
| 5395 | 185 aa hypothetical protein | |||
| 13550 | 233 aa hypothetical protein | |||
| 13555 | V | V.PaeRN21ORF739P (100% identity) | V.PaeF016ORF13565P | |
| 13560 | R | PaePALA39ORF724P (100% identity) | PaeF016ORF13565P | |
| 13565 | M | M.PspAK6UORFHP (100% identity) | M.PaeF016ORF13565P | |
| 13570 | ATP-binding protein | |||
| 26740 | Arc family DNA-binding protein | |||
| 26745 | M | M.PspHORFAP (100% identity) | M.PaeF016ORF26745P | |
| 26750 | nucleoid-associated protein YejK | |||
| 28455 | FUSC family protein | |||
| 28460 | M | M.PaesPA3ORF29655P (100% identity) | M.PaeF016ORF28460P | |
| 28465 | Com family DNA-binding transcriptional | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22085 | 330 aa hypothetical protein | |||
| 22090 | M | M.PaeF078ORF6215P (100% identity) | M.PaeF016ORF22090P | |
| 22095 | R | PaeF078ORF6215P (100% identity) | PaeF016ORF22090P | |
| 22100 | 44 aa hypothetical protein | |||
| 24775 | AAA family ATPase | |||
| 24780 | R | PaePALA14ORF2040P (100% identity) | PaeF016ORF24785P | |
| 24785 | M | M.PaePALA14ORF2040P (98% identity) | M.PaeF016ORF24785P | |
| 24790 | transposase | |||