Pseudomonas aeruginosa F008 |
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Putative Pseudomonas aeruginosa F008 RM systems
Ref: Kyrkou,I. et al. unpublished
REBASE ref # 38188
Complete sequence: 6,967,870 bp
GenBank #: CP115284
REBASE acronym: PaeF008
Org_num: 75629
All begin PCP30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11270 | IS3-like element IS222 family transposase | |||
| 11275 | R | PdePDENORFFP (100% identity) | CCCNNNNNGTAG | PaeF008ORF11295P |
| 11280 | S | S.PdePDENORFFP (100% identity) | CCCNNNNNGTAG | S.PaeF008ORF11295P |
| 11285 | ATP-dependent helicase | |||
| 11290 | AAA family ATPase | |||
| 11295 | M | M2.PdePDENORFFP (99% identity) | CCCNNNNNGTAG | M2.PaeF008ORF11295P |
| 11300 | M | M1.PaeWS394ORF2447P (100% identity) | CCCNNNNNGTAG | M1.PaeF008ORF11295P |
| 11305 | DNA-processing protein DprA | |||
| 15815 | Abi family protein | |||
| 15820 | M | M.Pae15003ORFEP (100% identity) | M.PaeF008ORF15820P | |
| 15825 | S | S.PaesS1ORF2970P (59% identity) | S.PaeF008ORF15820P | |
| 15830 | IS66 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | IS30-like element ISPpu17 family transposase | |||
| ??? | M | M.PaePD2aORF19395P (100% identity) | M.PaeF008ORF40P | |
| 50 | transposase | |||
| 205 | 45 aa hypothetical protein | |||
| 210 | M | M.PaePALA29ORF3380P (100% identity) | M.PaeF008ORF210P | |
| 215 | 167 aa hypothetical protein | |||
| 4675 | 45 aa hypothetical protein | |||
| 4680 | M | M.PaePALA29ORF3380P (100% identity) | M.PaeF008ORF4680P | |
| 4685 | 167 aa hypothetical protein | |||
| 6085 | Com family DNA-binding transcriptional | |||
| 6090 | M | M.PaesPA2ORF5550P (100% identity) | M.PaeF008ORF6090P | |
| 6095 | quorum-sensing transcriptional repressor QscR | |||
| 8065 | IS3-like element IS222 family transposase | |||
| 8070 | V | V.PaePB367ORF15990P (100% identity) | V.PaeF008ORF8075P | |
| 8075 | M | M.PaeWS394ORF3066P (100% identity) | M.PaeF008ORF8075P | |
| 8080 | 850 aa hypothetical protein | |||