Pseudomonas aeruginosa F062 |
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Putative Pseudomonas aeruginosa F062 RM systems
Ref: Kyrkou,I. et al. unpublished
REBASE ref # 38188
Complete sequence: 6,951,289 bp
GenBank #: CP115215
REBASE acronym: PaeF062
Org_num: 74977
All begin PCP19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9345 | sigma 54-interacting transcriptional regulator | |||
| 9350 | R | Psp8999ORF59750P (99% identity) | PaeF062ORF9360P | |
| 9355 | DNA recombination protein RmuC | |||
| 9360 | M | M.Psp8999ORF59750P (100% identity) | M.PaeF062ORF9360P | |
| 9365 | S | S.Psp8999ORF59750P (99% identity) | S.PaeF062ORF9360P | |
| 9370 | AAA family ATPase | |||
| 26625 | restriction endonuclease | |||
| 26630 | M | M.PspAK6UORFGP (100% identity) | AAGNNNNNNCTGG | M.PaeF062ORF26630P |
| 26635 | 270 aa hypothetical protein | |||
| 26640 | AAA family ATPase | |||
| 26645 | S | S.PaeRN21ORF2494P (100% identity) | AAGNNNNNNCTGG | S.PaeF062ORF26630P |
| 26650 | R | PaeRN21ORF2494P (99% identity) | AAGNNNNNNCTGG | PaeF062ORF26630P |
| 26655 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | nucleoid-associated protein YejK | |||
| 1755 | M | M.PspHORFAP (100% identity) | M.PaeF062ORF1755P | |
| 1760 | Arc family DNA-binding protein | |||
| 11735 | ATP-binding protein | |||
| 11740 | M | M.PspAK6UORFHP (100% identity) | M.PaeF062ORF11740P | |
| 11745 | ATP-binding protein | |||
| 11750 | V | V.PaeRN21ORF739P (100% identity) | V.PaeF062ORF11740P | |
| 11755 | 233 aa hypothetical protein | |||
| 25890 | AAA family ATPase | |||
| 25895 | M | M.PspAK6UORFEP (97% identity) | M1.PaeF062ORF25895P | |
| 25900 | M | M.PspAK6UORFFP (100% identity) | M2.PaeF062ORF25895P | |
| 25905 | 142 aa hypothetical protein | |||
| 29455 | Com family DNA-binding transcriptional | |||
| 29460 | M | M.PaesPA3ORF29655P (100% identity) | M.PaeF062ORF29460P | |
| 29465 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32575 | transposase | |||
| 32580 | M | M.PaePALA14ORF2040P (98% identity) | M.PaeF062ORF32580P | |
| 32585 | R | PaePALA14ORF2040P (100% identity) | PaeF062ORF32580P | |
| 32590 | AAA family ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26620 | AlpA family transcriptional regulator | |||
| 26625 | R | PaeR031MrrP (100% identity) | PaeF062MrrP | |
| 26630 | class I SAM-dependent DNA methyltransferase | |||