Pseudomonas aeruginosa F078 |
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Putative Pseudomonas aeruginosa F078 RM systems
Ref: Kyrkou,I. et al. unpublished
REBASE ref # 38188
Complete sequence: 7,070,483 bp
GenBank #: CP115192
REBASE acronym: PaeF078
Org_num: 74935
All begin PCP55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16865 | sigma 54-interacting transcriptional regulator | |||
| 16870 | R | Psp8999ORF59750P (99% identity) | PaeF078ORF16880P | |
| 16875 | DNA recombination protein RmuC | |||
| 16880 | M | M.Psp8999ORF59750P (100% identity) | M.PaeF078ORF16880P | |
| 16885 | S | S.Psp8999ORF59750P (100% identity) | S.PaeF078ORF16880P | |
| 16890 | AAA family ATPase | |||
| 28035 | tyrosine-type recombinase/integrase | |||
| 28040 | R | PaeRN21ORF2494P (100% identity) | AAGNNNNNNCTGG | PaeF078ORF28060P |
| 28045 | S | S.PaeRN21ORF2494P (100% identity) | AAGNNNNNNCTGG | S.PaeF078ORF28060P |
| 28050 | AAA family ATPase | |||
| 28055 | 270 aa hypothetical protein | |||
| 28060 | M | M.PspAK6UORFGP (99% identity) | AAGNNNNNNCTGG | M.PaeF078ORF28060P |
| 28065 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3965 | Com family DNA-binding transcriptional | |||
| 3970 | M | M.PaesPA3ORF29655P (100% identity) | M.PaeF078ORF3970P | |
| 3975 | FUSC family protein | |||
| 10035 | Arc family DNA-binding protein | |||
| 10040 | M | M.PspHORFAP (100% identity) | M.PaeF078ORF10040P | |
| 10045 | nucleoid-associated protein YejK | |||
| 19255 | ATP-binding protein | |||
| 19260 | M | M.PspAK6UORFHP (100% identity) | M.PaeF078ORF19260P | |
| 19265 | ATP-binding protein | |||
| 19270 | V | V.PaeRN21ORF739P (100% identity) | V.PaeF078ORF19260P | |
| 19275 | 233 aa hypothetical protein | |||
| 27245 | 185 aa hypothetical protein | |||
| ??? | M | M.Caq63ORFFP (100% identity) | M.PaeF078ORF27250P | |
| 27255 | DNA topoisomerase III | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6205 | 44 aa hypothetical protein | |||
| 6210 | R | PaeF016ORF22090P (100% identity) | PaeF078ORF6215P | |
| 6215 | M | M.PaeF016ORF22090P (100% identity) | M.PaeF078ORF6215P | |
| 6220 | 329 aa hypothetical protein | |||
| 8070 | AAA family ATPase | |||
| 8075 | R | PaePALA14ORF2040P (100% identity) | PaeF078ORF8080P | |
| 8080 | M | M.PaePALA14ORF2040P (98% identity) | M.PaeF078ORF8080P | |
| 8085 | transposase | |||