Streptomyces species NBC_00342 |
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Putative Streptomyces species NBC_00342 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
Complete sequence: 8,501,228 bp
GenBank #: CP107999
REBASE acronym: Ssp342
Org_num: 74988
All begin OHA41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13480 | RNA polymerase sigma factor | |||
| 13485 | M | M.Ssp1259ORF24675P (100% identity) | M.Ssp342ORF13485P | |
| 13490 | Uma2 family endonuclease | |||
| 30120 | TldD/PmbA family protein | |||
| 30125 | R | SspYPW6ORF27795P (94% identity) | Ssp342ORF30135P | |
| 30130 | S | S.Sza84ORF11570P (67% identity) | S.Ssp342ORF30135P | |
| 30135 | M | M.SanVUW1ORF6615P (95% identity) | M2.Ssp342ORF30135P | |
| 30140 | DUF397 domain-containing protein | |||
| 30145 | DUF5753 domain-containing protein | |||
| 30150 | M | M.SspMut1ORF6140P (93% identity) | M1.Ssp342ORF30135P | |
| 30155 | AIPR family protein | |||
| 31570 | 952 aa hypothetical protein | |||
| 31575 | R | Ssp84ORF30355P (98% identity) | Ssp342ORF31585P | |
| 31580 | S | S.Ssp288ORF19510P (62% identity) | S.Ssp342ORF31585P | |
| 31585 | M | M.Ssp36ORF3010P (90% identity) | M.Ssp342ORF31585P | |
| 31590 | 700 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7720 | DEAD/DEAH box helicase | |||
| 7725 | RM | Sgr01652ORF7360P (84% identity) | Ssp342ORF7725P | |
| 7730 | DUF397 domain-containing protein | |||
| 12555 | 93 aa hypothetical protein | |||
| ??? | M | M.Ssp1390ORFAP (85% identity) | M.Ssp342ORFAP | |
| 12565 | 231 aa hypothetical protein | |||
| 16635 | 471 aa hypothetical protein | |||
| 16640 | R | SspSSORFCP (57% identity) | Ssp342ORF16640P | |
| 16645 | 82 aa hypothetical protein | |||
| 32190 | NlpC/P60 family protein | |||
| 32195 | M | M.SfiNBSH44ORF19980P (99% identity) | M.Ssp342ORF32195P | |
| 32200 | DUF5655 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24580 | 256 aa hypothetical protein | |||
| 24585 | R | Ssp1259ORF13215P (99% identity) | Ssp342ORF24585P | |
| 24590 | methyltransferase domain-containing protein | |||