Streptomyces species NBC_00119 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptomyces species NBC_00119 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
Complete sequence: 10,962,160 bp
GenBank #: CP108195
REBASE acronym: Ssp119
Org_num: 74659
All begin OHU69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12060 | transposase | |||
| 12065 | M | M.Ssp391ORF6790P (94% identity) | M.Ssp119ORF12065P | |
| 12070 | S | S.SspSS7ORF12955P (48% identity) | S.Ssp119ORF12065P | |
| 12075 | R | Ssp598ORF3020P (96% identity) | Ssp119ORF12065P | |
| 12080 | 213 aa hypothetical protein | |||
| 12150 | RloB family protein | |||
| 12155 | M | M.Sal70ORF4765P (91% identity) | M.Ssp119ORF12155P | |
| 12160 | type I restriction endonuclease | |||
| 49795 | 418 aa hypothetical protein | |||
| 49800 | R | Ssp378ORF425P (100% identity) | Ssp119ORF49810P | |
| 49805 | S | S.Ssp378ORF425P (100% identity) | S.Ssp119ORF49810P | |
| 49810 | M | M.Ssp378ORF425P (100% identity) | M.Ssp119ORF49810P | |
| 49815 | 713 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12935 | ATP-binding protein | |||
| 12940 | R | R2.Ssp75703ORF17575P (65% identity) | Ssp119ORF12960P | |
| 12945 | PD-(D/E)XK motif protein | |||
| 12950 | AIPR family protein | |||
| 12955 | V | V.Ssp663ORF20075P (63% identity) | V.Ssp119ORF12960P | |
| 12960 | M | M.Sam23877ORF4023P (71% identity) | M.Ssp119ORF12960P | |
| 12965 | transporter | |||
| 28965 | 165 aa hypothetical protein | |||
| 28970 | M | M.Ssp378ORF21270P (99% identity) | M.Ssp119ORF28970P | |
| 28975 | 215 aa hypothetical protein | |||
| 30280 | DUF397 domain-containing protein | |||
| 30285 | M | M2.Ssp378ORF19955P (100% identity) | M1.Ssp119ORF30285P | |
| 30290 | M | M1.Ssp378ORF19955P (99% identity) | M2.Ssp119ORF30285P | |
| 30295 | DUF6339 family protein | |||
| 30300 | 299 aa hypothetical protein | |||
| 30305 | 656 aa hypothetical protein | |||
| 30310 | PD-(D/E)XK motif protein | |||
| 30315 | Z1 domain-containing protein | |||
| 30320 | V | V.Ssp378ORF19955P (100% identity) | V.Ssp119ORF30285P | |
| 30325 | SEC-C domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 43190 | 154 aa hypothetical protein | |||
| 43195 | R | Ssp386MrrP (96% identity) | Ssp119MrrP | |
| 43200 | dihydrolipoyl dehydrogenase | |||