Streptomyces virginiae NBC 00488 |
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Putative Streptomyces virginiae NBC 00488 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
Complete sequence: 8,933,679 bp
GenBank #: CP107871
REBASE acronym: Svi00488
Org_num: 75134
All begin OG624_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19830 | DNA polymerase III subunit gamma and tau | |||
| 19845 | M | M.Ssp001ORF18665P (100% identity) | M.Svi00488ORF19845P | |
| 19850 | S | S.Ssp001ORF18665P (99% identity) | S.Svi00488ORF19845P | |
| 19855 | R | SspPBH53ORF18905P (92% identity) | Svi00488ORF19845P | |
| 19860 | site-specific integrase | |||
| 25975 | AAA family ATPase | |||
| 25980 | R | SprPR11IP (95% identity) | Svi00488ORF25990P | |
| 25985 | S | S.Ssp926ORF108162P (57% identity) | S.Svi00488ORF25990P | |
| 25990 | M | M.Ssp926ORF108162P (78% identity) | M.Svi00488ORF25990P | |
| 25995 | type II toxin-antitoxin system RelE/ParE family | |||
| 30155 | 62 aa hypothetical protein | |||
| 30160 | M | M2.Ssp29ORF30885P (99% identity) | M2.Svi00488ORF30160P | |
| 30165 | S | S.Ser5ORF29160P (99% identity) | S.Svi00488ORF30160P | |
| 30170 | M | M1.Ser5ORF29160P (100% identity) | M1.Svi00488ORF30160P | |
| 30175 | 77 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16185 | SEC-C metal-binding domain-containing protein | |||
| 16190 | V | V.Svi8ORF24330P (100% identity) | V.Svi00488ORF16195P | |
| 16195 | M | M2.Svi20ORF25410P (100% identity) | M1.Svi00488ORF16195P | |
| 16200 | M | M1.Svi8ORF24330P (100% identity) | M2.Svi00488ORF16195P | |
| 16205 | DUF6339 family protein | |||
| 17235 | 198 aa hypothetical protein | |||
| 17240 | M | M.Svi5ORF22790P (100% identity) | M.Svi00488ORF17240P | |
| 17245 | 237 aa hypothetical protein | |||
| 30120 | DUF397 domain-containing protein | |||
| 30125 | RM | Ssp29ORF30850P (86% identity) | Svi00488ORF30125P | |
| 30130 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25965 | NUDIX domain-containing protein | |||
| 25970 | R | Ssp0775ORF21495P (82% identity) | Svi00488ORF25970P | |
| 25975 | AAA family ATPase | |||
| 25970 | 248 aa hypothetical protein | |||
| 25975 | R | Ssp0775ORF21490P (84% identity) | Svi00488ORF25975P | |
| 25980 | DEAD/DEAH box helicase family protein | |||