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Putative Escherichia coli T28R RM systems
Ref: Ding,P. unpublished
REBASE ref # 38139
Sequence length: | GenBank #: | |
Chromosome: | 4,606,706 bp | CP142708 |
plasmid pT28R-F1: | 354,983 bp | CP142705 |
plasmid pT28R-F2: | 354,983 bp | CP142706 |
plasmid pT28R-F3: | 263,549 bp | CP142707 |
REBASE acronym: Eco28R
Org_num: 74063
All begin VVK16_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
7065 | cell division protein DamX | |||
7070 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco28RDamP |
7075 | ribulose-phosphate 3-epimerase | |||
10590 | TraR/DksA family transcriptional regulator | |||
10595 | M | M.EcoT28RORF5110P (100% identity) | M.Eco28RORF10595P | |
10600 | replication endonuclease | |||
14360 | phosphohydrolase | |||
14365 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco28RDcmP |
14370 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco28RDcmP |
14375 | drug/metabolite exporter YedA | |||
plasmid pT28R-F1 | ||||
160 | 55 aa hypothetical protein | |||
165 | M | M.Sen23ORF25130P (100% identity) | CCWGG | M.Eco28RORF165P |
170 | thermonuclease family protein | |||
640 | DNA-binding protein | |||
645 | M | M.Ype21801ORF197P (100% identity) | M.Eco28RORF645P | |
650 | 273 aa hypothetical protein | |||
plasmid pT28R-F2 | ||||
2155 | 273 aa hypothetical protein | |||
2160 | M | M.Ype21801ORF197P (100% identity) | M.Eco28RORF2160P | |
2165 | DNA-binding protein | |||
2635 | thermonuclease family protein | |||
2640 | M | M.Sen23ORF25130P (100% identity) | CCWGG | M.Eco28RORF2640P |
2645 | 55 aa hypothetical protein | |||
plasmid pT28R-F3 | ||||
4970 | DNA-binding protein | |||
4975 | M | M.Ype21801ORF197P (100% identity) | M.Eco28RORF4975P | |
4980 | 273 aa hypothetical protein |