Escherichia coli FG92-1 |
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Putative Escherichia coli FG92-1 RM systems
Ref: Lu,X. et al. unpublished
REBASE ref # 38135
| Sequence length: | GenBank #: | |
| Chromosome: | 4,684,739 bp | CP142677 |
| plasmid pFG92-1-109kb: | 109,871 bp | CP142679 |
| plasmid pFG92-1-MCR1: | 252,870 bp | CP142678 |
REBASE acronym: EcoFG921
Org_num: 74058
All begin VR550_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19755 | adenine/cytosine-specific restriction | |||
| 19760 | R | Ecoc20ORFEP (100% identity) | CACNNNNNNGTTG | EcoFG921ORF19765P |
| 19765 | M | M.Vez21522ORFCP (68% identity) | CACNNNNNNGTTG | M.EcoFG921ORF19765P |
| 19770 | S | S.EcosS142ORF37770P (100% identity) | CACNNNNNNGTTG | S.EcoFG921ORF19765P |
| 19775 | endoribonuclease SymE | |||
| plasmid pFG92-1-109kb | ||||
| 24785 | DNA polymerase III subunit theta | |||
| 24230 | M | M.EcoBCCORF43220P (99% identity) | M.EcoFG921ORF24230P | |
| 24235 | S | S.EfeC18ORF22895P (99% identity) | S.EcoFG921ORF24230P | |
| 24240 | R | Eal10705ORF1060P (99% identity) | EcoFG921ORF24230P | |
| 24245 | 41 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoFG921DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoFG921ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 9040 | phosphohydrolase | |||
| 9045 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoFG921DcmP |
| 9050 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoFG921DcmP |
| 9055 | drug/metabolite exporter YedA | |||
| 14925 | replication endonuclease | |||
| 14930 | M | M.EcoSCU306ORF6255P (100% identity) | GATC | M.EcoFG921ORF14930P |
| 14935 | TraR/DksA family transcriptional regulator | |||
| 15465 | NinE family protein | |||
| 15470 | M | M.EcoYSP81ORFGP (96% identity) | GATC | M.EcoFG921ORF15470P |
| 15475 | recombination protein NinB | |||
| 16720 | DUF1317 family protein | |||
| 16725 | M | M.EcoTL14ORF18050P (100% identity) | M.EcoFG921ORF16725P | |
| 16730 | cell division protein ZapA | |||
| 19970 | HNH endonuclease | |||
| 19975 | R | SflFF17ORF19275P (64% identity) | EcoFG921ORF19975P | |
| 19980 | IS1-like element IS1B family transposase | |||
| plasmid pFG92-1-MCR1 | ||||
| 23495 | 55 aa hypothetical protein | |||
| 23500 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoFG921ORF23500P |
| 23505 | thermonuclease family protein | |||
| 24080 | 48 aa hypothetical protein | |||
| 24085 | M | M.YpsF1ORFBP (100% identity) | M.EcoFG921ORF24085P | |
| 24090 | 202 aa hypothetical protein | |||
| 24200 | DNA-binding protein | |||
| 24205 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoFG921ORF24205P |
| 24210 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18015 | protein YdfV | |||
| 18020 | R | Efe35473GmrSDP (96% identity) | EcoFG921GmrSD2P | |
| 18025 | recombinase family protein | |||
| 19775 | endoribonuclease SymE | |||
| ??? | R | EcosS142GmrSDP (100% identity) | EcoFG921GmrSDP | |
| 19790 | 15 aa hypothetical protein | |||