Bacteroides fragilis ATCC 43858 |
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Putative Bacteroides fragilis ATCC 43858 RM systems
Ref: Myers,L.L. et al. J Clin Microbiol 25 (12), 2330-2333 (1987)
REBASE ref # 38114
Complete sequence: 5,188,551 bp
GenBank #: CP142686
REBASE acronym: Bfr43858
Org_num: 73995
All begin VVD37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12120 | lysylphosphatidylglycerol synthase transmembrane | |||
| 12125 | R | Bfr322ORF18810P (100% identity) | Bfr43858ORF12130P | |
| 12130 | M | M.Bfr492ORF10300P (100% identity) | M.Bfr43858ORF12130P | |
| 12135 | S | S1.Bfr492ORF10300P (60% identity) | S1.Bfr43858ORF12130P | |
| 12140 | S | S2.Bfr492ORF10300P (100% identity) | S2.Bfr43858ORF12130P | |
| 12145 | S | S2.Bfr322ORF18810P (100% identity) | S3.Bfr43858ORF12130P | |
| 12150 | S | S1.Bfr322ORF18810P (54% identity) | S4.Bfr43858ORF12130P | |
| 12155 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 710 | DEAD/DEAH box helicase | |||
| 715 | RM | BfrGUT04ORFEP (100% identity) | Bfr43858ORF715P | |
| 720 | helix-turn-helix transcriptional regulator | |||
| 3415 | 116 aa hypothetical protein | |||
| 3420 | M | M.Bfr95ORF1620P (99% identity) | M.Bfr43858ORF3420P | |
| 3425 | 125 aa hypothetical protein | |||
| 8925 | phage/plasmid replication protein | |||
| 8930 | M | M.PdiGP102ORF4130P (63% identity) | M.Bfr43858ORF8930P | |
| 8935 | R | NspPS340ORF10935P (47% identity) | Bfr43858ORF8930P | |
| 8940 | 149 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10745 | pseudouridine synthase | |||
| 10750 | R | BfrP207ORF975P (100% identity) | Bfr43858ORF10755P | |
| 10755 | M | M.BfrP207ORF975P (100% identity) | M.Bfr43858ORF10755P | |
| 10760 | TIM-barrel domain-containing protein | |||
| 17245 | 56 aa hypothetical protein | |||
| 17250 | C | C.Hgu7ORFXP (100% identity) | C.Bfr43858ORF17255P | |
| 17255 | M | M.Hgu7ORFXP (100% identity) | M.Bfr43858ORF17255P | |
| 17260 | R | Hgu7ORFXP (100% identity) | Bfr43858ORF17255P | |
| 17265 | 266 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19025 | imidazole glycerol phosphate synthase subunit | |||
| 19040 | R | BfrP207GmrSDP (100% identity) | Bfr43858GmrSDP | |
| 19045 | P-loop NTPase fold protein | |||