Streptomyces species NBC_01233 |
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Putative Streptomyces species NBC_01233 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
Complete sequence: 10,187,596 bp
GenBank #: CP108514
REBASE acronym: Ssp233
Org_num: 74871
All begin OG332_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 29615 | 216 aa hypothetical protein | |||
| 29620 | M | M.Ssp94ORF11630P (99% identity) | M.Ssp233ORF29620P | |
| 29625 | S | S.Ssp669ORF27520P (42% identity) | S.Ssp233ORF29620P | |
| 29630 | R | Ssp94ORF11630P (98% identity) | Ssp233ORF29620P | |
| 29635 | DUF5655 domain-containing protein | |||
| 31040 | RloB family protein | |||
| 31045 | M | M.Ssu27467ORF10340P (96% identity) | M.Ssp233ORF31045P | |
| 31050 | S | S.Ssu27467ORF10340P (54% identity) | S.Ssp233ORF31045P | |
| 31055 | DUF397 domain-containing protein | |||
| 31060 | helix-turn-helix transcriptional regulator | |||
| 31065 | ATP-binding protein | |||
| 31070 | 122 aa hypothetical protein | |||
| 31075 | R | Svi60ORF11290P (82% identity) | Ssp233ORF31045P | |
| 31080 | M48 family metallopeptidase | |||
| 37680 | N-6 DNA methylase | |||
| 37685 | M | M.Sfr3ORF21900P (92% identity) | M.Ssp233ORF37685P | |
| 37690 | S | S.SalLBX2ORFDP (39% identity) | S.Ssp233ORF37685P | |
| 37695 | R | Ssp178JORF14870P (96% identity) | Ssp233ORF37685P | |
| 37700 | serine/threonine protein kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10540 | 209 aa hypothetical protein | |||
| 10545 | M | M.Ssp1506ORF39475P (82% identity) | M.Ssp233ORF10545P | |
| 10550 | WhiB family transcriptional regulator | |||
| 14315 | 130 aa hypothetical protein | |||
| 14320 | M | M.Ssp1207ORF30635P (96% identity) | M.Ssp233ORF14320P | |
| 14325 | 161 aa hypothetical protein | |||
| 16525 | Z1 domain-containing protein | |||
| 16530 | R | R1.Stu75ORF17150P (75% identity) | R1.Ssp233ORF16545P | |
| 16535 | R | R1.Ssp1197ORF22600P (62% identity) | R2.Ssp233ORF16545P | |
| 16540 | V | V.Sve15068ORF25250P (75% identity) | V.Ssp233ORF16545P | |
| 16545 | M | M.Ssp191ORF14025P (80% identity) | M.Ssp233ORF16545P | |
| 16550 | HNH endonuclease | |||
| 20690 | DNA polymerase III subunit gamma and tau | |||
| 20705 | M | M.Ssp1343ORF18500P (97% identity) | M.Ssp233ORF20705P | |
| 20710 | R | Ssp1343ORF18500P (97% identity) | Ssp233ORF20705P | |
| 20715 | tyrosine-type recombinase/integrase | |||
| 23400 | IS110 family transposase | |||
| 23405 | M | M.SviS21ORF18120P (96% identity) | M.Ssp233ORF23405P | |
| 23410 | phospholipase D family protein | |||
| 29655 | replicative DNA helicase | |||
| 29660 | M | M.Ssp351ORF5905P (98% identity) | M.Ssp233ORF29660P | |
| 29665 | 289 aa hypothetical protein | |||
| 30300 | helicase-related protein | |||
| 30305 | M | M.Ssp0071ORF15235P (88% identity) | M.Ssp233ORF30305P | |
| 30310 | Swt1 family HEPN domain-containing protein | |||
| 34760 | AAA family ATPase | |||
| 34765 | RM | Ssp007ORF13395P (90% identity) | Ssp233ORF34765P | |
| 34770 | DEAD/DEAH box helicase | |||
| 37070 | replicative DNA helicase | |||
| 37075 | M | M.SspICC4ORF41360P (88% identity) | M.Ssp233ORF37075P | |
| 37080 | 295 aa hypothetical protein | |||
| 37235 | C40 family peptidase | |||
| 37240 | M | M.Ssp435ORF5095P (99% identity) | M.Ssp233ORF37240P | |
| 37245 | DUF4913 domain-containing protein | |||
| 37675 | 190 aa hypothetical protein | |||
| 37680 | M | M1.Ssp6075ORF29130P (85% identity) | M.Ssp233ORF37680P | |
| 37685 | type I restriction-modification system subunit | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32770 | alpha/beta hydrolase | |||
| 32775 | R | Svi60MrrP (92% identity) | Ssp233MrrP | |
| 32780 | DNA topoisomerase IV subunit A | |||
| 34705 | UvrD-helicase domain-containing protein | |||
| 34710 | R | SspSH5McrCP (97% identity) | Ssp233McrCP | |
| 34715 | R | SspSH5McrBP (98% identity) | Ssp233McrBP | |
| 34720 | sigma-70 family RNA polymerase sigma factor | |||