Streptomyces species NBC_01213 |
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Putative Streptomyces species NBC_01213 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
| Sequence length: | GenBank #: | |
| Chromosome: | 8,165,836 bp | CP108541 |
| plasmid unnamed1: | 152,878 bp | CP108542 |
| plasmid unnamed2: | 102,480 bp | CP108543 |
REBASE acronym: Ssp213
Org_num: 74862
All begin OG725_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 36220 | 190 aa hypothetical protein | |||
| 36225 | M | M.Ssp1208ORF36945P (99% identity) | M.Ssp213ORF36225P | |
| 36230 | 79 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7785 | DEAD/DEAH box helicase | |||
| 7790 | RM | Ssp1212ORF8220P (83% identity) | Ssp213ORF7790P | |
| 7795 | PASTA domain-containing protein | |||
| 7890 | AAA family ATPase | |||
| 7895 | M | M.SspAlt3ORF8545P (100% identity) | M.Ssp213ORF7895P | |
| 7900 | MBL fold metallo-hydrolase | |||
| 18665 | very short patch repair endonuclease | |||
| 18670 | M | M.Ssp1212ORF19280P (100% identity) | M.Ssp213ORF18670P | |
| 18675 | R | Ssp1212ORF19280P (100% identity) | Ssp213ORF18670P | |
| 18680 | glutamate--tRNA ligase | |||
| 20420 | 188 aa hypothetical protein | |||
| 20425 | RM | Ssp1212ORF21105P (99% identity) | Ssp213ORF20425P | |
| 20430 | GntR family transcriptional regulator | |||
| 20895 | DUF4352 domain-containing protein | |||
| 20900 | M | M.Ssp1212ORF21580P (100% identity) | M.Ssp213ORF20900P | |
| 20905 | 226 aa hypothetical protein | |||
| 22310 | 330 aa hypothetical protein | |||
| 22320 | M | M1.Ssp201ORF23010P (100% identity) | M1.Ssp213ORF22320P | |
| 22325 | M | M2.Ssp201ORF23010P (100% identity) | M2.Ssp213ORF22320P | |
| 22330 | V | V.Ssp201ORF23010P (100% identity) | V.Ssp213ORF22320P | |
| 22335 | TetR/AcrR family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 37195 | 128 aa hypothetical protein | |||
| 37200 | M | M.Ssp006ORF42315P (82% identity) | M.Ssp213ORF37200P | |
| 37205 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7875 | sigma-70 family RNA polymerase sigma factor | |||
| 7880 | R | Ssp1212McrBP (99% identity) | Ssp213McrBP | |
| 7885 | R | SspAlt3McrC2P (99% identity) | Ssp213McrCP | |
| 7890 | AAA family ATPase | |||