Streptomyces species NBC_01212 |
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Putative Streptomyces species NBC_01212 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
Complete sequence: 8,231,656 bp
GenBank #: CP108545
REBASE acronym: Ssp1212
Org_num: 74861
All begin OG722_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5020 | 89 aa hypothetical protein | |||
| 5025 | M | M.SspGSSD12ORF29420P (61% identity) | M.Ssp1212ORF5025P | |
| 5030 | 247 aa hypothetical protein | |||
| 8215 | DEAD/DEAH box helicase | |||
| 8220 | RM | Sga8ORF6935P (86% identity) | Ssp1212ORF8220P | |
| 8225 | 174 aa hypothetical protein | |||
| 8310 | AAA family ATPase | |||
| 8315 | M | M.SspAlt3ORF8545P (100% identity) | M.Ssp1212ORF8315P | |
| 8320 | MBL fold metallo-hydrolase | |||
| 10665 | ATP-binding protein | |||
| 10670 | R | Kpa82ORF6565P (99% identity) | Ssp1212ORF10695P | |
| 10675 | PD-(D/E)XK motif protein | |||
| 10680 | AIPR family protein | |||
| 10685 | AbrB/MazE/SpoVT family DNA-binding | |||
| 10690 | V | V.Ssp1341ORF9815P (100% identity) | V.Ssp1212ORF10695P | |
| 10695 | M | M.Ssp1341ORF9815P (99% identity) | M.Ssp1212ORF10695P | |
| 10700 | DUF5655 domain-containing protein | |||
| 10700 | DUF5655 domain-containing protein | |||
| 10705 | M | M.Sun5ORF8970P (100% identity) | M.Ssp1212ORF10705P | |
| 10710 | C40 family peptidase | |||
| 19275 | very short patch repair endonuclease | |||
| 19280 | M | M.Ssp213ORF18670P (100% identity) | M.Ssp1212ORF19280P | |
| 19285 | R | Ssp213ORF18670P (100% identity) | Ssp1212ORF19280P | |
| 19290 | glutamate--tRNA ligase | |||
| 21100 | 188 aa hypothetical protein | |||
| 21105 | RM | Ssp213ORF20425P (99% identity) | Ssp1212ORF21105P | |
| 21110 | GntR family transcriptional regulator | |||
| 21575 | DUF4352 domain-containing protein | |||
| 21580 | M | M.Ssp213ORF20900P (100% identity) | M.Ssp1212ORF21580P | |
| 21585 | 226 aa hypothetical protein | |||
| 22990 | 330 aa hypothetical protein | |||
| 23000 | M | M1.Ssp213ORF22320P (100% identity) | M1.Ssp1212ORF23000P | |
| 23005 | M | M2.Ssp213ORF22320P (100% identity) | M2.Ssp1212ORF23000P | |
| 23010 | V | V.Ssp213ORF22320P (100% identity) | V.Ssp1212ORF23000P | |
| 23015 | TetR/AcrR family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8295 | sigma-70 family RNA polymerase sigma factor | |||
| 8300 | R | Ssp213McrBP (99% identity) | Ssp1212McrBP | |
| 8305 | R | Ssp213McrCP (99% identity) | Ssp1212McrCP | |
| 8310 | AAA family ATPase | |||