Streptomyces species NBC 01612 NBC_01612 |
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Putative Streptomyces species NBC 01612 NBC_01612 RM systems
Ref: Joergensen,T.S. et al. unpublished
REBASE ref # 38106
Complete sequence: 10,169,438 bp
GenBank #: CP109304
REBASE acronym: Ssp612
Org_num: 74615
All begin OHB52_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 125 | 597 aa hypothetical protein | |||
| 130 | M | M.Ssp612DndE2P (100% identity) | M.Ssp612DndEP | |
| 135 | DNA sulfur modification protein DndD | |||
| 130 | DNA sulfur modification protein DndE | |||
| 135 | M | M.Ssp612DndD2P (100% identity) | M.Ssp612DndDP | |
| 140 | DNA phosphorothioation system sulfurtransferase | |||
| 135 | DNA sulfur modification protein DndD | |||
| 140 | M | M.Ssp612DndC2P (100% identity) | M.Ssp612DndCP | |
| 145 | DNA sulfur modification protein DndB | |||
| 140 | DNA phosphorothioation system sulfurtransferase | |||
| 145 | M | M.Ssp612DndB2P (100% identity) | M.Ssp612DndBP | |
| 150 | cysteine desulfurase DndA | |||
| 145 | DNA sulfur modification protein DndB | |||
| 150 | M | M.Ssp612DndA2P (100% identity) | M.Ssp612DndAP | |
| 155 | DNA phosphorothioation-associated putative | |||
| 11580 | helicase-related protein | |||
| 11585 | RM | Ssp421ORF32535P (89% identity) | Ssp612ORF11585P | |
| 11590 | PASTA domain-containing protein | |||
| 11655 | UvrD-helicase domain-containing protein | |||
| 11660 | M | M.Ssp007ORF13500P (96% identity) | M.Ssp612ORF11660P | |
| 11665 | helix-turn-helix transcriptional regulator | |||
| 14710 | phospholipase D-like domain-containing protein | |||
| 14715 | M | M.Sal01672ORF24440P (90% identity) | M.Ssp612ORF14715P | |
| 14720 | 247 aa hypothetical protein | |||
| 26650 | ATP-binding protein | |||
| 26655 | M | M2.Ssp235ORF19665P (90% identity) | M1.Ssp612ORF26655P | |
| 26660 | M | M1.Ssp235ORF19665P (86% identity) | M2.Ssp612ORF26655P | |
| 26665 | DUF6339 family protein | |||
| 26670 | 270 aa hypothetical protein | |||
| 26675 | 662 aa hypothetical protein | |||
| 26680 | PD-(D/E)XK motif protein | |||
| 26685 | Z1 domain-containing protein | |||
| 26690 | V | V.Ssp235ORF19665P (81% identity) | V.Ssp612ORF26655P | |
| 26695 | SEC-C domain-containing protein | |||
| 37110 | replicative DNA helicase | |||
| 37115 | M | M.SspP3ORF31725P (98% identity) | M.Ssp612ORF37115P | |
| 37120 | 290 aa hypothetical protein | |||
| 44710 | DNA phosphorothioation-associated putative | |||
| 44715 | M | M.Ssp612DndAP (100% identity) | M.Ssp612DndA2P | |
| 44720 | DNA sulfur modification protein DndB | |||
| 44715 | cysteine desulfurase DndA | |||
| 44720 | M | M.Ssp612DndBP (100% identity) | M.Ssp612DndB2P | |
| 44725 | DNA phosphorothioation system sulfurtransferase | |||
| 44720 | DNA sulfur modification protein DndB | |||
| 44725 | M | M.Ssp612DndCP (100% identity) | M.Ssp612DndC2P | |
| 44730 | DNA sulfur modification protein DndD | |||
| 44725 | DNA phosphorothioation system sulfurtransferase | |||
| 44730 | M | M.Ssp612DndDP (100% identity) | M.Ssp612DndD2P | |
| 44735 | DNA sulfur modification protein DndE | |||
| 44730 | DNA sulfur modification protein DndD | |||
| 44735 | M | M.Ssp612DndEP (100% identity) | M.Ssp612DndE2P | |
| 44740 | 597 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11640 | sigma-70 family RNA polymerase sigma factor | |||
| 11645 | R | Ssp007McrBP (96% identity) | Ssp612McrB2P | |
| 11650 | R | Ssp007McrCP (95% identity) | Ssp612McrC2P | |
| 11655 | UvrD-helicase domain-containing protein | |||
| 29990 | type II toxin-antitoxin system Phd/YefM family | |||
| 29995 | R | Ssp26McrCP (85% identity) | Ssp612McrCP | |
| 30000 | R | Slu2McrBP (87% identity) | Ssp612McrBP | |
| 30005 | 75 aa hypothetical protein | |||