Pseudomonas species FFPRI_1 |
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Putative Pseudomonas species FFPRI_1 RM systems
Ref: Takatsuka,J. and Maehara,N. unpublished
REBASE ref # 38160
Complete sequence: 7,521,420 bp
GenBank #: AP029168
REBASE acronym: PspI1
Org_num: 74261
All begin FFPRI1PSEUD_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3970 | restriction system-associated AAA family ATPase | |||
| 3980 | S | S.AspAMDI (53% identity) | S.PspI1ORF3990P | |
| 3990 | M | M.Ppu03ORF29560P (86% identity) | M.PspI1ORF3990P | |
| 4000 | R | Csp13ORF18015P (90% identity) | PspI1ORF3990P | |
| 4010 | MarR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24630 | 267 aa hypothetical protein | |||
| 24640 | M | M.Pae14842ORFJP (45% identity) | M.PspI1ORF24640P | |
| 24650 | 184 aa hypothetical protein | |||
| 41460 | DNA topoisomerase III | |||
| 41470 | M | M.Pae698ORF2235P (100% identity) | M.PspI1ORF41470P | |
| 41480 | 185 aa hypothetical protein | |||
| 45030 | DEAD/DEAH box helicase | |||
| 45040 | RM | PmiR19ORFAP (78% identity) | PspI1ORF45040P | |
| 45050 | restriction endonuclease | |||
| 47180 | 207 aa hypothetical protein | |||
| 47190 | M | M.PprZF509ORF21065P (94% identity) | M.PspI1ORF47190P | |
| 47200 | 232 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45040 | class I SAM-dependent DNA methyltransferase | |||
| 45050 | R | Pfl11706MrrP (90% identity) | PspI1Mrr2P | |
| 45060 | 137 aa hypothetical protein | |||