Pseudomonas putida WBC-3 |
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Putative Pseudomonas putida WBC-3 RM systems
Ref: Peng,Z. et al. unpublished
REBASE ref # 38172
Complete sequence: 6,513,708 bp
GenBank #: CP142110
REBASE acronym: PpuWBC3
Org_num: 74259
All begin VPZ82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1170 | sigma 54-interacting transcriptional regulator | |||
| 1175 | R | Paz17556ORFDP (98% identity) | PpuWBC3ORF1180P | |
| 1180 | M | M.Psp8999ORF59750P (98% identity) | M.PpuWBC3ORF1180P | |
| 1185 | S | S.PaeCH46ORF1445P (67% identity) | S.PpuWBC3ORF1180P | |
| 1190 | GTPase | |||
| 26340 | 338 aa hypothetical protein | |||
| 26345 | R | PpuAA7IP (85% identity) | PpuWBC3ORF26350P | |
| 26350 | M | M.PmoBS011ORF9225P (93% identity) | M.PpuWBC3ORF26350P | |
| 26355 | S | S.PspB24ORF215P (49% identity) | S.PpuWBC3ORF26350P | |
| 26360 | winged helix-turn-helix domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2395 | group II intron reverse transcriptase/maturase | |||
| 2400 | RM | PspJYQORF25465P (100% identity) | PpuWBC3ORF2400P | |
| 2405 | DEAD/DEAH box helicase | |||
| 24435 | BREX-3 system phosphatase PglZ | |||
| 24440 | R | CspZM22ORF12460P (94% identity) | PpuWBC3ORF24455P | |
| 24445 | DUF4276 family protein | |||
| 24450 | AAA family ATPase | |||
| 24455 | M | M.SmaU331ORF4092P (67% identity) | M.PpuWBC3ORF24455P | |
| 24460 | 222 aa hypothetical protein | |||
| 26065 | integrase arm-type DNA-binding domain-containing | |||
| 26070 | RM | PaeP112ORF4814P (86% identity) | PpuWBC3ORF26070P | |
| 26075 | IS630 family transposase | |||